KEGG   Hevea brasiliensis (rubber tree): 110646827
Entry
110646827         CDS       T05150                                 
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110646827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbr03019]
    110646827
   03009 Ribosome biogenesis [BR:hbr03009]
    110646827
   04131 Membrane trafficking [BR:hbr04131]
    110646827
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hbr04147]
    110646827
Messenger RNA biogenesis [BR:hbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     110646827
Ribosome biogenesis [BR:hbr03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    110646827
Membrane trafficking [BR:hbr04131]
 SNARE
  SNARE associated proteins
   Others
    110646827
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    110646827
Exosome [BR:hbr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110646827
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 AAA_5 AAA_22 AAA_33 AAA_14 TIP49 NPHP3_N RNA_helicase nSTAND3 AAA_28 Mg_chelatase AAA_17 ATPase_2 AAA_18 Parvo_NS1 IstB_IS21 Viral_helicase1 ABC_tran AAA_7 NACHT Vps4_C NB-ARC AAA_24 TsaE DUF815 AAA_lid_PRS2_C Zeta_toxin Molydop_binding Zot
Other DBs
NCBI-GeneID: 110646827
NCBI-ProteinID: XP_021656083
LinkDB
Position
Unknown
AA seq 834 aa
MRTHYRKTSLLLICFAKISPFQYEIPTCTMSHQAESSDSKSAKKDFSTAILERKKSPNRL
IVDEAINDDNSVVSMHPETMEKLQLFRGDTILVKGKKRKDTICIALADDTCEPPKIRMNK
VVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPV
RKGDLFLVRGGMRSVEFKVIDTDPGEYCVVAPDTEIFCEGEPVRREDEDRLDEVGYDDVG
GVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFF
CINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQ
LLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKN
MKLSDEVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAV
TNEHFQTALGTSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFG
MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR
QSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPD
IIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADI
TEICQRACKYAIRENIEKDIEKEKRRRENPEAMDEDVEDEVAEIKAAHFEESMKFARRSV
SDADIRKYQAFAQTLQQSRGFGTEFRFSETRTSGAASDPFTTSAGGAEDDDLYG
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgcgcacgcactataggaaaacgagtcttttactcatttgcttcgccaaaatttctcca
tttcaatacgaaattccaacctgtacaatgtctcaccaagcggaatcgtccgattcgaaa
tcggcgaagaaagacttctcgacagccattttggagaggaagaagtcgccgaatcgactg
atcgttgacgaggctattaacgatgacaactcggtcgtttcgatgcatccggaaaccatg
gagaaactccagcttttccgcggtgataccattctcgttaagggcaagaaacggaaagat
acaatctgcattgctcttgctgatgacacctgtgagccaccaaagatcaggatgaacaag
gttgttagatctaacctgagggttcgacttggagatgttgtatctgtgcaccaatgccca
gatgttaagtatggaaagcgtgttcacattctgcccattgatgataccatagaaggtgtc
actgggaatctatttgatgcatacctgaaaccttatttcttggaggcttaccgacctgtg
aggaaaggggatcttttccttgtcagaggagggatgagaagtgtagagttcaaggtcata
gatactgatccaggagagtattgtgtggttgctccagatactgagattttctgtgagggg
gaacctgtgagaagggaggatgaggacaggctggatgaagtaggatatgatgatgttggt
ggtgtgcggaagcagatggctcagattcgtgagctagtggagctgccattgaggcatcct
caactttttaaatcaattggtgtgaaaccaccaaaaggaattttgctttatggaccccca
ggttctggaaagacattgatagctcgagctgttgctaatgaaactggtgcatttttcttc
tgtatcaatgggcctgaaataatgtccaaattggctggagagagtgaaagcaatctcagg
aaggcatttgaagaagctgagaagaatgctccatccatcatctttattgatgagattgat
tcaattgctcccaagcgtgagaagactcatggtgaagttgaaagacggattgtctcacag
cttttaacccttatggatgggctcaaatctagggcacatgttattgttattggagctact
aatcgtccaaacagtattgacccagctttgagaaggtttggaaggtttgatagggagata
gacattggtgtcccagatgaagttgggcgccttgaagttctacgaatccatacaaagaat
atgaaactctctgatgaggttgatctggaaaggattgctaaagatacccatggttatgtt
ggtgctgaccttgctgccctatgtactgaagctgcactccagtgcatcagagagaagatg
gatgtgattgacttggaagacgattctattgatgctgagatacttaattccatggcggtt
accaatgagcacttccaaactgcccttggaacaagcaacccatctgctttacgtgaaaca
gttgttgaagtgcccaatgttagctgggatgacattggtggtcttgagaatgttaagcgg
gagcttcaggagactgttcaatatcctgtggagcatccggagaaatttgagaagtttggc
atgtcgccttctaaaggtgtacttttctatggccctcctggatgcgggaaaactctgctg
gctaaagcaattgcaaatgaatgtcaggcaaacttcataagtgtcaagggtcctgaacta
ctcactatgtggtttggtgagagtgaagccaatgttagagaaatttttgacaaggcccga
caatctgcaccatgtgtccttttctttgatgagcttgactctattgctactcagagggga
agcagtgttggtgatgctggtggtgcagctgatcgggttttgaaccaacttcttactgaa
atggatggcatgtcagcaaagaagactgttttcataattggggccaccaacagacctgac
attattgacccagcacttttgcgtcctggccgtctagaccaattgatttatattcctctt
ccagatgaagattcacgacatcaaatcttcaaagcttgtctgaggaaatcacctgtctca
aaagatgttgatttgagggcattggccaagtatactcaaggattcagtggagctgatatt
actgaaatttgccagcgggcatgcaaatatgccataagggagaatatagagaaggatatt
gaaaaagagaagaggagaagggagaatcctgaggcaatggatgaggatgttgaggatgag
gtggctgagatcaaagctgctcattttgaggagtcaatgaaatttgctcgcaggagtgtt
agtgatgctgacattcgcaaatatcaagcatttgctcagacattgcagcaatctagggga
tttgggacagaatttaggttttcagaaacaaggaccagtggtgcagcatctgatccattc
acaacttcagctggtggagctgaagatgatgatctgtatggttag

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