Hevea brasiliensis (rubber tree): 110646941
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Entry
110646941 CDS
T05150
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110646941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hbr04121
]
110646941
03036 Chromosome and associated proteins [BR:
hbr03036
]
110646941
Ubiquitin system [BR:
hbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110646941
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
110646941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR41
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
110646941
NCBI-ProteinID:
XP_021656258
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MENSNQESHLRSDNSITYESPYPLYAMAFSSSPSPNHNHHQRIAVGSFIEEYSNRVEILS
FDLETLSFKTHPTLSLDHPYPPTKLMFHPAAPSSLRKSSDLLASSGDFLRLWEVRESSVE
PISVLNNSKTSEFFAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIERGAVETQLIAHDKEV
HDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDAQALIWDLPTVA
GPNGIDPMSMYSATAEINQLQWSAAQPDWIAIAFSSKMQLLKV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactctaaccaagaatcgcacctccgatccgataattctatcacctatgaatcc
ccataccctctttacgccatggctttctcctcctccccttcgcccaaccacaaccaccac
caacgcatcgccgtcggcagcttcattgaagaatacagcaaccgtgtcgaaattctttcc
ttcgacctcgagaccctctccttcaagactcatcctactctttccctcgaccacccctac
ccacccaccaagctcatgttccatccagccgctccttcctctctccgcaagtcctccgac
ctcctcgcctcctccggcgactttcttcgcctctgggaagtccgtgaaagctccgttgaa
cccatctccgtccttaataatagcaagaccagcgaattttttgctccgttgacgtctttt
gattggaacgagatcgagcccaagagaattgggacttgcagcattgatacgacatgtact
atttgggatattgaaaggggtgctgttgaaacccagctaattgcccatgataaggaggtt
cacgacattgcttggggagaagcaagggtttttgcttcggtttctgcagatgggtcggtg
agaattttcgatttgagggataaggagcactccaccatcatctacgagagtccccagcct
gatacgcccttgctcagattggcttggaataagcaggatttgaggtacatggctactatt
ttgatggatagtaacaaagttgtgattttggatattagatcaccaaccatgcctgttgcg
gaattggaaaggcaccgagcgagtgttaatgccattgcttgggctccgcagagctgtagg
cacatttgctctgctggagatgatgcacaggccctcatttgggacttgcctactgttgct
gggcctaacgggattgatcccatgtctatgtactctgctactgctgaaatcaaccagctg
caatggtcagctgcacagcctgattggattgcaattgcattttctagtaaaatgcagctt
ttgaaagtttga
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integrated database retrieval system
