Hevea brasiliensis (rubber tree): 110647026
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Entry
110647026 CDS
T05150
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03082
ATP-dependent chromatin remodeling
hbr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110647026
03083 Polycomb repressive complex
110647026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbr03036
]
110647026
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110647026
Histone modification proteins
HAT complexes
HATB complex
110647026
HDAC complexes
Sin3A-HDAC complex
110647026
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110647026
PRC2.2
110647026
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110647026
Heterochromatin formation proteins
Other heterochromatin formation proteins
110647026
Chromatin remodeling factors
NuRD complex
110647026
NuRF complex
110647026
NuRF complex (fruit fly)
110647026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT122_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
110647026
NCBI-ProteinID:
XP_021656350
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MEPQVVKKRGRKPKPKDEKDQQQQSAGKMKEGKKIQQPSVDEKYTQWKSLVPVLYDWLAN
HNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHIS
QFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATHTDSPDVLIWDVEAQPNRHAVL
GATNSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITASATDPATAK
SPGSGGSIIKKAGNGNDKTADSPVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLI
LWDARVGSSPAVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGTP
VHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVERPTRAPSSPAGLFF
QHAGHRDKVVDFHWNAFDPWTIVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLAELEK
FKSHVIACASKP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcaagtcgtgaaaaagagaggccgtaagcccaagcctaaagatgagaaagat
cagcagcagcagagtgctggcaaaatgaaggaaggaaagaagattcagcagccttctgtc
gacgagaagtacactcagtggaagtctttggttccagttctctacgactggctcgctaac
cataatctcgtttggccctctctctcttgccggtggggtccgcagcttgagcaagctact
tacaagaatcgccaacgtctctacctttctgagcagactgatggtagtgttccaaatact
ttggttattgcaaattgtgaagttgtcaagcctagagttgctgctgcagagcacatatct
cagtttaatgaagaagcacgctctccatttgtgaagaagtacaagaccatcatacaccct
ggagaggtgaacagaatcagagaactcccccagaatagtaggatagtggccactcatact
gacagccctgatgttctcatatgggatgttgaagcacagcctaatcgccatgctgttctt
ggagctacaaattctcgcccagatttgattttgactggacatcaagataatgctgaattt
gctcttgcaatgtgcccaactgaaccctttgtgctttctggagggaaggacaagtcagta
gttttgtggagtatccaggaccatataacagcatctgctactgacccagcaacagcgaag
tctcctggatctggaggatcaatcattaaaaaggctgggaatggcaatgataaaactgct
gacagtcctgtgggaccacgaggtatctaccgggggcatgaggatacggtagaagatgtg
acattctgcccatccagtgcacaggagttctgtagtgtaggagatgattcttgccttata
ttatgggatgctcgagttggctctagtccagctgtgaaggttgaaaaggcacacaatgct
gatcttcactgtgttgattggaatcctcatgatgataaccttattttaactgggtcagca
gataattctgttcgcatgtttgatcggcggaatctcacttctaatggagttgggacacct
gtccataagtttgagggtcacaaagctgctgttctttgtgtacagtggtctccagataag
tcatctgtgtttggaagttctgcagaagatggtctcctcaatatttgggattatgagaag
gttggtaagaaggtagagcggccaactagagccccaagttctcctgcaggattgtttttc
cagcatgctgggcacagggataaagttgttgacttccattggaacgcatttgatccttgg
acgatcgttagcgtgtcagatgactgtgataccactggaggagggggaacattacagata
tggcgtatgagtgatttgatctataggccggaagatgaggttttggcagagcttgagaag
ttcaagtcgcatgtgattgcatgtgcttctaagccttga
DBGET
integrated database retrieval system
