Hevea brasiliensis (rubber tree): 110647448
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Entry
110647448 CDS
T05150
Name
(RefSeq) RNA polymerase sigma factor sigA-like isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110647448
Transcription machinery [BR:
hbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110647448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
HTH_36
HTH_24
Motif
Other DBs
NCBI-GeneID:
110647448
NCBI-ProteinID:
XP_021656961
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MMVTAAVVGLSAGKKFLSSTFYYSDLTEKLFNVNDNGLTHYQIASTKNVIVAKKSSNYGP
SYPSSNRNTQSIKALKEHMDTASAPSTAATRFKTFHDIEEDISDLDYSVEALLLLQKSML
EKQWNLSFERTASSDSTNKKSQKKIPVTCSGLSARQRRINTRRKNLSQSKSIVQASTFKQ
LKSAVSPELLQNRLKGYVKGVVSEELLTHAEVVCLSRIIKAGLSMEEHRSRLKERLGCEP
SDEELATSLRISRAELQSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR
LAEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYVADN
CLENNPWHGVDEWALKEEVNKLINVTLQEREREIIRLYYGLDNESLTWEDISKRIGLSRE
RIRQVGLVALEKLKHAARKKKLEAMLVKH
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcactgcagcagttgtcggacttagtgcaggaaagaagttcttgagttctacc
ttttattattctgaccttacagaaaagcttttcaatgtcaatgataatggattaacccac
taccaaattgcttcaacaaagaatgtgatagttgcaaaaaagtcatcaaattatggcccc
agttacccatcatccaatagaaatacacagtctattaaggctcttaaagaacatatggat
actgcctctgctccctcaactgcagcaacacggttcaagacattccatgacatagaagag
gatatttctgatctcgactattcagtggaggcacttctcttgttgcagaagtcaatgctt
gagaaacagtggaatctttcgtttgagaggacagcctcaagtgattcaaccaataaaaaa
agtcaaaagaagatacctgtcacttgctctggattatctgctcgacaacggagaataaat
actaggaggaagaatctgagccaaagtaaatccatagtgcaagctagtacatttaagcag
ctaaaatcagctgtcagtcctgagctgctgcagaatcgtttgaagggttatgttaagggt
gtagtaagtgaagagcttctcacgcatgcagaagttgtatgcctgtcaaggataattaaa
gctggtctttccatggaagaacatagatccaggctgaaggagagattaggatgtgagccc
tctgatgaagaactcgcaacttccttgaggatatctcgtgcagagttacaatccaaattg
atagcttgttctttggcaagagagaaactagcaatgagcaatgttcgtctagttatgtct
attgctcaaagatatgataacatgggcgctgaaatggctgaccttgttcagggaggtttg
attggactattgcgtggcattgagaagtttgattcttcaaaggggttcaaaatttcaact
tatgtttattggtggatacgtcagggtgtttcaagagcattagttgagaattcgagaacc
ttaagactgcctaatcatttacatgaaaggttaggcttaatacgaaatgcaaaaatcaga
ctggcagagaaaggagtaactccttcaattgatagaattgcagagtccctgaatatgtcc
cagaaaaaagttaggaatgcgacagaggcaattagcaaggtcttttcacttgatagggaa
gcattcccctctttgaatggtctcccaggagagactcaccatagttacgttgcagataat
tgccttgagaacaacccatggcatggagtagatgaatgggcactcaaggaagaagtaaac
aagcttatcaatgtgactcttcaagaacgagaaagggagattataagactttactatggt
ttggataatgaatcccttacatgggaggacattagtaagcggataggtttgtccagagag
agaattcgacaagtcgggcttgttgcactagagaaattaaaacatgctgcaaggaagaag
aagctggaggccatgctagtgaaacattga
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integrated database retrieval system
