Hevea brasiliensis (rubber tree): 110648517
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Entry
110648517 CDS
T05150
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hbr04131
]
110648517
Membrane trafficking [BR:
hbr04131
]
Protein recycling
Others
EARP complex
110648517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
110648517
NCBI-ProteinID:
XP_021658465
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MQPNLFPFGTVFGNPFLFNGDLSDAGVGGFESSRVFFLVPFLLFQGGGMDLSKVGEKILS
SVRSARSLGLLPSTSDRPEVPARAAAAAAVARVLAGLPPHQRLNLPSSSEELSSIYGSRS
HGQVVEELEEDFYEEDFDPVRHILEHIPSEENELDHFEKQAALRLAQLDRVSERLSHQVM
EHYEVMVKGMNLVRELEKDLKVANVICMNGRRHLTSSRNEVSRDLIVNSNSKKKQALLDL
LPILSDLHHALDMQAALESLVEEGNYCKAFQVLSEYLQLLDSFSELSAMQEMTRGVEVWL
GRTLQKLDSLLLGVCQEFKEESYITVVDAYALIGDVSGLAEKIQSFFMQEVLSETHSVLK
NILQEDQEVEMQSSRLTYSDLCLQIPDSKLRQCLLRTLAVLFRLMCSYHEIMIFQLENKD
WASQTSNMKPRETGNSERSGEAQQIDSATGISSDPQEINGSISKSVDSMPTEEPITTVSK
ADHMGTTNSIYSDSHYQVDEARSDSTGASSSGSPWYHLRKDATAFVSQTLQRGRKNLWQL
TTSRVSVLLSSSAVGSISIHQFLKNYEDLNLFILAGEAFCGVEAVEFRQKLKVVCENYFV
AFHRQNIYALKMVLEKENWLKLQSDTVQAISFDGLVGDGAPLIGGNSINVRLHHSHKPLN
LVDPTAKKDGFTSWLRNGNPFSLKLMHTSKEGHSSSLINGATSNEYDGHTNDSYHADFMS
PKSSDANHSNGTPVSEDENEDLLADFIDEDSQLPSRISKLNHSRSKSAHWKNDEITAQTG
SSICLLRSMDKYARLMQKLEIVNVEFFKGICQLFEVFFYFIFETFGQQNSNSNGKGLSDS
VNYRLKIALSRVSQDCDQWIKSQSTISTSSPTSLSTYMHADLTPTNPQNHSAATSFGLKE
RCAAADNISLVARILHRSKTHLQSMLLQNNPAIVEDFYATLVDSVPDLTEHIHRTTARLL
LHINGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIHKEVQDLLLEHGL
KIVAETLIEGLSRVKKCTDEGRALMSLDLQVLINGLQHFVSINVKPKLQLVETFIKAYYL
PETEYVHWARAHPEYSKNQIVGLINLVATMKGWKRKTRLEIIEKIE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaatctctttccttttggtaccgtctttgggaatccctttctcttcaatggt
gatttgagcgacgctggtgtcggtggatttgagagctctagggttttcttcttggtcccc
tttttgttgttccaaggaggtggcatggatttgtccaaggttggtgagaagattttgagc
tctgttcgttccgctagatcgcttggtctcttgccttccacctctgatcgacctgaggtt
ccagcaagagctgcggctgctgcagctgttgctcgtgttcttgctggactgcctcctcat
cagcgattgaatcttccatcaagttctgaagaattaagctcaatatatgggagcagatca
catggtcaagtggtggaggaactagaagaggacttctacgaagaggattttgatccagtt
agacacattttagagcatattccatctgaagaaaatgagttggaccattttgagaaacag
gctgctcttaggttagcacaattggatagagtatcagaacgtttatcccaccaagttatg
gagcattatgaagtaatggtgaaggggatgaatttggtcagggaattagagaaagacttg
aaggttgcaaatgtcatctgcatgaatggaagaaggcacttaacctcatcaaggaatgag
gtctcaagggatctcattgtaaattctaattccaaaaagaaacaagctctcctggatttg
cttcctatattatctgaccttcatcatgcattggacatgcaagcagctcttgaatcatta
gttgaagaaggaaattattgcaaggcattccaagtactatctgaatatttacagctatta
gatagtttttcagagctttcagccatgcaggagatgactcgtggagttgaggtttggttg
ggaagaacccttcaaaagctggattcacttttattaggagtgtgccaggagttcaaggaa
gagagttatataactgtggttgatgcttatgctttaattggagatgtatctggtcttgct
gaaaagattcaaagcttctttatgcaggaagttctttcagaaacccactctgttttgaag
aatattttgcaagaggaccaagaagtagaaatgcagagtagcagacttacctacagtgat
ctatgccttcagatacctgattctaagttaaggcagtgtttgttgagaacactagctgtc
ttattcaggttgatgtgttcctatcatgagatcatgatctttcagctggagaacaaggat
tgggcatcccaaacatcaaatatgaagccgagggaaactggcaactctgaacgatctgga
gaggcccagcaaattgattcagctactggaatttcttctgatcctcaagaaattaatggc
tctatctctaaatctgtggacagcatgccgacagaagaacctattaccactgtgtctaag
gcagaccatatgggaactacaaattccatttattcagattctcattatcaagttgatgaa
gctaggagtgacagcactggagcatcaagcagcggatccccttggtatcatctgcggaaa
gatgctactgcttttgtctcacaaactcttcagagaggtcggaagaatctttggcagctt
acaacaagtcgagtatcagtattactttcttcttctgcagttggttcaataagcattcac
caattcttgaaaaattatgaagatctgaatttattcatcttggctggtgaagccttctgt
ggtgttgaagcagttgagtttaggcagaagttgaaggttgtttgtgagaattattttgta
gcattccatcggcaaaatatttatgcacttaaaatggttttggaaaaggagaattggctg
aaattacaatcagatacagtacaagcaatcagttttgatgggcttgttggggatggggca
cccttgatcggtggtaactccattaatgtcagactgcatcattctcataaaccattgaat
ttggttgatcctactgctaagaaggatggttttacaagttggcttagaaatggaaaccca
ttttcgctaaaactaatgcacacttccaaagaaggccatagttcatccctaattaatgga
gcaacttcaaatgaatacgatggacatactaatgatagttatcatgctgattttatgtcc
cccaaaagtagtgatgccaatcattcgaatggaactcctgtttcagaagatgagaatgaa
gatctacttgcagacttcattgatgaggatagtcaactcccaagtcgaatttcaaagcta
aatcattcgagaagtaaatctgcacattggaaaaatgatgagataactgcacaaacggga
tcatctatatgtcttctaaggtcaatggataaatatgcaaggctcatgcagaaactagaa
atagtgaatgttgagttttttaaggggatatgccagttgtttgaggtttttttctacttt
atatttgaaacatttggtcagcaaaattccaactcaaatggaaaaggtttatctgattct
gtcaattatcgactgaagatagccttatccagagtatcacaggattgtgaccaatggata
aaatcccagtcaacaatatctacttcttcacccacatctttaagtacatatatgcatgca
gatttaacaccaactaatcctcagaatcattcagcagccacatcttttggtctcaaggaa
agatgtgcagcggccgataatatctctctcgttgctcgtatattacacagatccaaaacc
catcttcagtcaatgcttcttcaaaataatcctgctatcgtggaggatttctatgcaacc
ttggtggattctgtaccagatcttacagagcatatacataggacaactgcaagactactt
ttacatattaatggttatgttgaccgaattgctaatgctaaatgggaagtaaaagagctt
ggactagagcataatgggtacgttgatttgttgttgggagaatttaagcactataaaacg
aggcttgctcatggaggaatccacaaggaggttcaggacctccttctagaacatggtctc
aaaattgtggctgaaactctcattgaaggtctctcacgagtgaagaagtgtactgatgaa
ggccgagctctcatgtcattggatcttcaggttttgatcaatggcttgcaacattttgtc
tccataaatgtgaagccaaagttacaattagttgaaactttcattaaggcttactacctt
ccagaaactgagtatgtgcactgggcccgtgctcacccagaatattctaagaatcaaatt
gttgggttgattaaccttgttgctacaatgaaaggttggaagaggaaaaccaggttggaa
ataatagaaaagattgagtga
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