Hevea brasiliensis (rubber tree): 110648534
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Entry
110648534 CDS
T05150
Name
(RefSeq) protein CHROMATIN REMODELING 8 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110648534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbr03036
]
110648534
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110648534
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110648534
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
110648534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
HDA2-3
WHD_SOWAH
Motif
Other DBs
NCBI-GeneID:
110648534
NCBI-ProteinID:
XP_021658494
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MEEDEDKVLLSTLGITSANPEDIERDILAEVRDNAENDGEAGGSTVVLPDKSKNIDPSST
NQTKLYNRLRAVKFEIDAVASTFEQVRNVASSEDHDDDDKAECGDRKDDVLVSPNDFTLQ
RALAADRLKSLKRTKVQIEKELSNLHEDDTTKGVDYENLLADMVREETRRNRNVKEVQKP
GKKKERSQRKVSFNDDTDFDAMLDAASTGFVETERDELVRKGILTPFHKLKGFERGLQQP
GPSSGCKVSEEEERSDDIASDSIARASQSMREAMKARPMTKMLDLDSLPKLEAPTHPFQR
LKTPLQVPPSPESDAEKGKGAKRKTKRPLPGQKWSKRISHEENHLEESDGARCGSVTSSY
EEEKLEDGEDNGDSSFVTLEGGLKIPEAIFNELFEYQKVGVQWLWELHCQRAGGIIGDEM
GLGKTIQVLSFLGALHFSNMYKPSIVVCPVTLLRQWKREAQKWYPRFHVELLHDSAQDLA
HRKKQAKSYDSDNESEGSLDSNYEGNLSSKNSNKWDSLINRVLKSESGLLITTYEQLRLL
GEKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDF
VFPGKLGVLPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKVDVD
AQLPKKTEHVLFCSLTAEQRSVYRAFLASTEVEQILDGNRNSLYGIDVMRKICNHPDLLE
REHSCQNPDYGNPVRSGKMKVIAQVLKVWQEQGHRVLLFSQTQQMLDILESFLISSGYCY
RRMDGLTPIKQRMALIDEFNNSNDVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDM
QARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMK
DLFTLNDDGESGSTETFNIFSQLSEDVNVVGAKKEKQDKQKHHKCRASRADDAAMDQESK
PDTGCSRMKGKEKANHSDEVDEETNILRSLFDAHGIHSAMNHDAIMNAHDEEKMRLEEQA
SQVAQKAAEALRQSRMLRSRDSISVPTWTGKSGTAGAPSSVSQKFGLTVNSQLIRSSDQS
SSNKTSSLNGIAAGASAGKALSSAELLAKIRGNQEKAVGAGLASSSANRARSENGMSSQN
SSSVQPEILIRQICTFIQQRGGNADSSSIVQHFKDRIPSKDLPLFKNLLKEIAKLEEDQN
GKLWVLKPEYGQQ
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatgaggacaaagttcttctcagtactttgggaataacgtctgcaaatcct
gaagacattgagcgtgacattttagcagaggtgagagataatgctgaaaatgatggtgaa
gctggagggagcactgtggtgcttcctgacaagtcaaaaaacattgatccatcatctacc
aaccaaacaaaactctataatagattgagggctgtaaaatttgaaatagatgctgttgct
tctacttttgaacaagtgagaaatgttgccagtagtgaagaccatgatgatgatgataaa
gcagagtgtggggatagaaaggatgatgtgctggtttctcccaatgatttcactcttcaa
cgagccctagctgctgatcggctaaaaagtcttaagaggacaaaggttcaaattgagaaa
gaactttcaaatttgcatgaggatgacactaccaagggagttgactatgaaaatctgttg
gcagacatggttagggaagaaactagacgaaatagaaatgtgaaagaagttcagaaacca
ggcaaaaaaaaggaaaggagtcagagaaaggtttcatttaatgatgatacagactttgat
gcaatgttggatgcagcttctactggatttgttgaaacagaaagggatgagctggtcagg
aaaggtattttaaccccttttcataagcttaagggatttgagcgcggtcttcagcagcca
gggccatcaagtgggtgcaaagtatctgaggaagaggaaaggagtgatgatattgcttct
gacagtattgctagagcttcccagtcaatgagagaggccatgaaagctcgcccgatgact
aaaatgcttgatttggattctctgccaaagcttgaggctcctactcatccttttcagagg
ctgaaaacacctttgcaagtccctccatccccagaaagtgatgcagagaaggggaagggc
gcaaaaaggaaaacaaaacgtcctttgccaggccagaaatggagcaaacgaatttcacat
gaggaaaaccacttggaagaaagtgatggtgcaaggtgtggctcagttacatccagctat
gaagaggaaaagctagaggatggtgaagataatggtgattcttcctttgtaacacttgaa
ggtgggctgaaaatccccgaagctatttttaatgaactttttgaataccagaaagtggga
gtgcagtggctatgggaactgcattgccaaagggctggtggtattattggggatgagatg
ggtcttggtaagaccatccaggtcttatcttttctgggagcattgcacttcagtaacatg
tacaaaccaagcattgttgtttgccctgtcacactcttgcgacaatggaaaagggaagca
cagaagtggtacccacgctttcatgtggagctactacatgattcagcacaagatttggct
cataggaagaagcaggccaaatcttatgatagtgataatgaaagtgaaggttcgcttgac
agcaattatgaggggaatttatcatctaaaaattccaataaatgggattccttaataaat
cgagttctgaaatcagagtctgggttgcttataaccacttatgagcaactaaggctgcta
ggagaaaaattgcttgacattgagtggggctatgcagttctggatgaaggacatcgaatt
cgcaatccaaatgctgaaattactctggtttgcaaacagcttcaaacggttcaccgtata
ataatgacaggagcaccaattcaaaacaagttgagtgaactgtggtccctgtttgatttt
gttttccctggtaaactgggggtactgccagtttttgaggctgaatttgctgttcctata
tctgttggtggctatgccaatgcctcaccactgcaagtatctacagcctacaggtgtgct
gtggtcctgcgtgacttgattatgccttatcttcttcgtcgcatgaaggtggatgtggat
gcacagcttccaaaaaaaactgaacacgtcctcttttgtagccttactgcagagcaacgt
tccgtgtatagagcatttcttgcaagtactgaggttgaacaaatacttgatggaaatagg
aattccttatatggaatagatgtgatgcgcaaaatatgtaaccaccctgatctgcttgag
agagagcattcatgtcaaaatccagactatggaaatcccgtacgaagtggaaaaatgaaa
gtcattgcccaagtgcttaaggtttggcaggagcagggacatcgtgttcttcttttttct
caaactcaacaaatgcttgacattctcgaaagtttcttaatttctagtggttattgctac
cgacgaatggatggccttactccgataaagcagagaatggccctaatagatgaatttaac
aactcaaatgatgtcttcattttcatcttaactacaaaggttggtggattagggactaat
ctaaccggtgcaaatagagtgatcatctttgacccggattggaatccttcaactgacatg
caggcaagggaaagggcttggcgtattggtcagaaacgggatgtcactgtttatagattg
attacacgtggaactattgaggagaaggtgtaccaccggcagatttacaaacattttctt
acaaataagatattgaaaaacccacagcagagaaggttctttaaagctcgagatatgaag
gatcttttcactttgaatgatgatggagagagtgggtcaactgaaacatttaacattttc
agtcagttatctgaagatgtaaatgttgttggtgcaaagaaagaaaagcaggacaagcag
aaacaccataaatgtagggcatcacgtgctgatgatgctgcaatggaccaggaaagcaaa
cctgataccggatgctccaggatgaaagggaaagaaaaagcaaatcatagtgatgaagtg
gatgaagaaacaaatattttgaggagtctttttgatgctcatggcatacatagtgcaatg
aaccatgatgctattatgaatgcacatgatgaagagaagatgagacttgaggagcaggct
tcccaagttgcgcaaaaggcagcagaagcattgcgtcaatcacgaatgctgcgtagtcgt
gatagcatatctgtcccaacatggacagggaaatcggggactgccggtgcaccatcttct
gttagccagaaatttggattaactgtgaattcccagctgattaggtcttctgatcaatca
tccagcaataaaacaagcagcttgaatggaatagctgctggagcttctgctggaaaggca
ttatcctcagctgaactacttgcaaaaattcgtggaaatcaagaaaaggctgttggtgct
gggctggcatcaagttctgctaacagagcaaggtctgaaaatggaatgtcatctcaaaat
tcatctagcgtccagcctgaaatactgattcggcagatctgtacattcatacaacaaaga
ggtggaaacgctgattcatcaagcatagtgcagcacttcaaggataggatcccttcaaag
gatctgcccttgtttaagaatcttttgaaggagatagctaaattggaggaagaccaaaat
ggaaaattgtgggttttgaagccagagtatggacagcaataa
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