Hevea brasiliensis (rubber tree): 110648803
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Entry
110648803 CDS
T05150
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110648803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110648803
03036 Chromosome and associated proteins [BR:
hbr03036
]
110648803
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110648803
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110648803
PBAF complex
110648803
GBAF(ncBAF) complex
110648803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF7685
Motif
Other DBs
NCBI-GeneID:
110648803
NCBI-ProteinID:
XP_021658851
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MPASPSDGRGKWKRRKREPQITRKQHPKLEDPDDEDEDDAFEEDNNNNDHLDDDSEGPNP
NPNLPQSAALPDPNHLETEVFADSGVRICDFPSVTKLAVNRPHESVFAVVTLERANLIGE
SSGSSRGPVPNLENVSYGQLQAVSAVPAEGLGSDQERNDGGNSAYVVTPPPIMEGKGVVK
RFGNRVHVVPMHSDWFSPAMVNRLERQVVPHFFSGKSPDHTPEKYMECRNYVVAKYMENP
EKRITVSDCQGLVAGIENEDLARTVRFLDHWGIINYCAAPPSCESWNGGSYLREDPNGEV
HVPSAALKSIDSLIKFDKPKCRLKAADVYSSLSCHDDEFSDLDNKIRERLSENRCTYCSQ
PLPGVYHQSQKEIDVLLCSDCFHEGRFVTNHSSLDFIKMDPTKDYGDLDGESWSDQETLL
LLEAMEVYNENWNEIAEHVGTKSKSQCILHFLRLPMEDGLLENIEVPSMSKSPNLSSRDD
HGRIHMRSNGDLPGSCLQDADAESRIPFANSGNPVMSLVAFLASAVGPRVAAACAHASLA
ALSEDNRVNLERLHGREGNFHGEVANSNQQKEDNLRGSLGPSEAEGVPLSAEKVKAAAKA
GLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMRECEQVEKTR
QRFAAERARILSSRIGPAGATSQMNLAGVSPSMVNNNIGSSRQQVMPTSSSQPTVSGYGN
NQQIHPHMSFMQRGQPQPMFPLGPRLPLAAIQPSSSAPSNVMFNPPGNSQPSLNQMLRSV
SGPSSGLG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccgtcagatggcagaggcaaatggaagaggcgaaagcgggagcctcaa
atcactcgaaagcaacaccccaaactcgaagaccctgatgatgaagacgaagacgacgcc
tttgaggaagataacaacaataatgaccacctcgatgacgattctgagggccccaacccc
aacccaaaccttcctcaatctgctgctcttcctgatcccaaccatcttgaaactgaggtc
ttcgctgacagtggggtccgcatttgtgacttcccttccgtcactaagcttgctgtgaat
cggccccatgagtcggttttcgctgtggtgaccttagagagggcgaatttgattggggag
agtagtggtagtagtagggggccggtgcccaatttggagaatgtgtcgtacgggcagctg
caggcagtctctgctgtgcctgctgagggtttggggtccgatcaggagagaaatgatggt
gggaattctgcatatgtggtaacgcctcctccaattatggagggcaaaggtgttgtaaaa
cgatttggaaatagagttcatgtggttccaatgcattcagattggttttcaccagcaatg
gtgaatcgattagaaagacaagtggtaccgcattttttctctggaaaatcaccagatcat
actccagagaaatacatggaatgtaggaattatgttgttgctaaatatatggagaatcca
gagaagaggatcacagtttctgattgtcagggattggttgctggaattgagaatgaagat
ttagctagaactgttaggtttcttgatcattggggaattatcaattactgtgcagcccca
ccaagctgtgaatcctggaatggtgggtcctacttaagagaggatccaaatggtgaggtt
cacgtgccatcagctgctttaaagtcaattgatagtttgatcaaatttgacaaacccaaa
tgtaggctcaaggcagctgacgtttattcatcattgtcatgtcatgatgatgaattctct
gacttggacaacaaaattcgagagcgtctttctgaaaatcgttgcacttattgttctcag
cctcttcctggtgtataccatcagtcacagaaggagattgatgtactactatgttctgac
tgcttccatgaagggaggtttgtgaccaatcattcaagcctggattttataaagatggat
ccaacaaaggattatggtgatttagatggagagagttggagtgatcaagaaacattattg
ctgctcgaggcaatggaggtttacaatgaaaattggaatgaaattgcagaacatgttgga
acaaagtcaaaatcacagtgcattcttcattttcttcgtctacccatggaggatggcctg
ttggaaaatatcgaagtaccaagcatgtctaagtcacctaatttatcaagtagagatgat
catggaagaatacatatgcgatcaaatggtgatctgccaggatcctgcctccaagatgct
gatgctgaaagcaggattccttttgcaaattcagggaatccagttatgtcgttggttgcc
tttctggcctctgctgttggaccaagagttgctgcagcatgtgcccatgcatccttggca
gcattgtctgaggataatagggtgaatttggagagattacatggtagagaaggtaatttt
catggagaagttgcaaattcaaatcaacaaaaggaagacaacttgcgtggttcattgggt
ccaagtgaggcagagggtgttcctttatctgcagaaaaagtcaaagctgctgctaaagct
ggtcttgctgctgcagcaactaaagctaaactatttgcagatcatgaagaaagagaaatt
caaaggctatctgctaatatcattaatcatcagttgaagagattggagctaaagttgaag
cagtttgcagaggtggaaacttttctaatgagagagtgtgaacaagtggagaagaccagg
caaaggtttgctgctgagcgggcccgcattctatcgtcccggattggacctgctggggct
acttcacaaatgaacctggctggagtttctccttccatggttaacaataacatcggcagc
agtaggcaacaagtgatgcctacctcttcttcacagccaaccgtttcaggatatggcaac
aatcaacagatccatccccacatgtcatttatgcaacggggacaaccacagccaatgttt
ccattagggccaaggctgcccctagccgctatacaaccatcctcatctgctccatcaaat
gttatgttcaatccccctggaaattcacagcccagtctcaatcaaatgctgaggtctgtg
tcggggcctagctctggtttaggttga
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