Hevea brasiliensis (rubber tree): 110650125
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Entry
110650125 CDS
T05150
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03082
ATP-dependent chromatin remodeling
hbr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110650125
03083 Polycomb repressive complex
110650125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbr03036
]
110650125
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110650125
Histone modification proteins
HAT complexes
HATB complex
110650125
HDAC complexes
Sin3A-HDAC complex
110650125
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110650125
PRC2.2
110650125
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110650125
Heterochromatin formation proteins
Other heterochromatin formation proteins
110650125
Chromatin remodeling factors
NuRD complex
110650125
NuRF complex
110650125
NuRF complex (fruit fly)
110650125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
eIF2A
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
110650125
NCBI-ProteinID:
XP_021660636
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MEPQVVKKRGRKPKPKDEKDQQQQSSAKMKEGKKIQQPSVDDKYTQWKSLVPVLYDWFSN
HNLIWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHIS
QFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATHTDNPNVLIWDVEAQPNRHAVL
GATNSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITASATDPATGK
SPASGGSIIKKAGDGNDKAADSPSVGPRGIYQGHEDTVEDVTFCPSSAQEFCSVGDDSCL
ILWDARVGSSPAVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGI
PVYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVERPTRATTSPAGLF
FQHAGHRDKVVDFHWNVSDPWTIVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLTELE
KFKSHVIACASKP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcaagtggtgaaaaagagaggtcgaaaacccaagcccaaagacgagaaagat
cagcaacagcagagttctgccaaaatgaaagagggaaagaagattcagcaaccttccgtc
gacgacaagtacactcagtggaagtctttggttcctgttctctatgactggttctctaac
cataatctcatttggccttctctctcttgccggtggggtccacagcttgagcaagctact
tacaagaatcgccaacgtctctacctttccgagcagactgatggtagtgttccaaatact
ttggttattgcaaattgtgaagttgtcaagcctagagttgctgctgcagagcacatatct
cagtttaatgaagaagcacgctctccatttgttaagaagtacaagaccatcatacatcct
ggagaggtgaacaggatcagggaacttccacagaatagtagaatagtggccactcatact
gacaaccctaatgttctcatatgggatgttgaagcacagcctaatcgccatgcagttctt
ggagctacaaattctcgtccagatttgattttgactggacatcaagataatgcagaattt
gctcttgcaatgtgcccaactgaaccctttgttctttctggagggaaggacaagtcagta
gttttgtggagtatccaggaccatataactgcatctgctactgacccagctacagggaag
tctccagcatctggcggatcaatcattaaaaaggctggggatggcaatgataaagctgct
gacagcccttctgtaggacctcgaggtatctaccagggacatgaggatacagtagaagat
gtgacattctgcccatccagtgcacaggagttctgtagtgtaggagatgattcttgccta
atactatgggatgctcgagttggctctagcccagcagtcaaggttgagaaggcacacaat
gctgatcttcactgtgttgattggaatccccatgatgataaccttattttaactgggtca
gctgataattctgtccgcatgtttgatcgacggaatctcacttctaatggagttgggata
cctgtctataagtttgagggtcacaaagctgctgttctttgtgtacagtggtctccagac
aagtcatctgtgtttggaagttcggcagaagatggtctcctaaatatttgggattatgag
aaggttggtaagaaggtagagcgcccgactagagccacaacttctcctgcaggattgttt
ttccagcatgctgggcacagggataaggttgtcgacttccattggaatgtatctgatcct
tggacaattgttagtgtgtcagatgactgtgataccaccggtggagggggaacattgcag
atatggcgcatgagtgatttgatctataggccagaagatgaggttttgacagagcttgag
aagttcaagtcacatgtgattgcatgtgcttcaaagccttga
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integrated database retrieval system
