Hevea brasiliensis (rubber tree): 110650282
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Entry
110650282 CDS
T05150
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03030
DNA replication
hbr03420
Nucleotide excision repair
hbr03430
Mismatch repair
hbr03440
Homologous recombination
hbr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110650282
03420 Nucleotide excision repair
110650282
03430 Mismatch repair
110650282
03440 Homologous recombination
110650282
03460 Fanconi anemia pathway
110650282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hbr03000
]
110650282
03032 DNA replication proteins [BR:
hbr03032
]
110650282
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110650282
Transcription factors [BR:
hbr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110650282
DNA replication proteins [BR:
hbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110650282
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110650282
MMR (mismatch excision repair)
110650282
DSBR (double strand breaks repair)
HR (homologous recombination)
110650282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
110650282
NCBI-ProteinID:
XP_021660871
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MGHRVSPDAIATLLSNPKPDSLSDIPEIIVQITKLEHKGKSYGFDANDGKMKIKAIFNSR
LSSEITSGNIQNLGLIRILDYTVNEIPSKSENYLIITKCEVVSPALEMEIKDEIRKEEAG
IIFKPKQEHEIKIEVKKEPSGILLKPKREMAAKSAAQIVHEQHRNMAPTARMAMTRRVHP
LVSLNPYQGNWIIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNDAARKF
YDKFQLGKVYYISKGTLRVANKQFRTVQNDYEMALNENSEVEEASNEAAFVPETKFNFVP
IDQLGPYINSNEFVDVIGVIQSVSPTMSIRRKSNNEIVPKRDITIADETKKTVVVSLWND
LATNVGQELLDLVDNSPVVAIKSLKVGDFQGVSLSTLGRSIVQINPDTPESNKLRCWYDS
DGKETSMASVGSGLSPSTKSGARSMYSDRVSISQITSNPSLGGDKPAFFSIRAYISFIKP
DQSMWYRACKTCNKKVTEAVGGGYWCEGCQKNDTECSLRYILVVKVSDASGEGWVSAFNE
AEKIIGCSADELDKLKSEKEGSSYQLKLKEATWNPHLFRVSVAQNEYNNEKRQRITVRAV
APVDFAAESRYLLEEISKMKDSP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaccgggtgagcccagatgctatagcgactttgctttcaaatcccaagccagat
tcactctctgatatccctgagatcatcgttcagatcaccaagcttgagcataaaggaaag
tcttatgggtttgatgctaatgatggaaaaatgaagataaaagcaattttcaactcccgt
ctgtcttctgagataacctctggaaacattcaaaacttgggtctcattcgtattcttgat
tatacagtcaatgaaattcctagtaaatcagaaaattacttgatcataacaaaatgtgaa
gtggtttctcctgcacttgaaatggagatcaaagatgagataagaaaggaagaagcagga
ataatattcaagccaaagcaagaacatgagatcaagattgaagtaaaaaaagaacctagt
ggcattcttttgaaaccaaagcgggaaatggctgcaaaatcagccgctcagatagtacat
gaacagcatagaaacatggctcctacagctcgaatggccatgacaagaagagttcaccct
ctcgtttccttgaatccttaccaaggcaattggatcatcaaagtccgagtcacaagtaaa
ggaaatatgcgtacttacaagaatgcaagaggagaagggtgcgttttcaatgtggagttg
acagatgaagatggtacgcagatacaagcaacaatgttcaatgatgctgcaaggaaattc
tatgacaaatttcagttggggaaggtttattacatatcaaagggaactcttagagttgct
aataagcagtttagaacagtacaaaatgactatgaaatggctttaaatgagaattctgaa
gtagaagaggccagtaatgaagcagcttttgtccctgaaacaaaattcaattttgttcca
attgatcaattgggtccatacattaattcgaatgagtttgttgatgttattggagtcatt
caaagtgtttctccaacaatgagcatccgaagaaagagcaacaacgagattgttccaaag
cgtgatataactattgcagatgagacgaagaagacagttgtggtctcactttggaatgat
cttgcaactaatgtggggcaggaattgcttgaccttgttgataactcgcctgtcgttgca
atcaaatcgcttaaagttggagattttcaaggtgtatctttgtccacattgggtagaagc
attgtacagatcaatccagatactcccgaatcaaataaactaagatgctggtatgattct
gatggcaaagagacttcaatggcttcagtaggctctggtttgagcccttcaaccaagagt
ggagcaagatctatgtactctgaccgagtctccatctctcaaataacaagcaatccatct
ttgggtggtgacaagcctgcatttttcagcattagagcgtatattagttttatcaagcct
gaccagagtatgtggtaccgggcttgcaagacttgcaataagaaggtgactgaagctgtt
ggaggtggatattggtgtgaaggatgccagaagaatgatacagagtgtagtttaaggtat
attctggtggttaaagtttcagatgcaagtggtgaaggttgggtttctgcattcaatgaa
gcagaaaagatcattggttgctctgctgatgaacttgataaactgaaatcagagaaagaa
gggagttcataccaattgaaattaaaagaagccacttggaatcctcatcttttcagggtc
agtgttgctcagaatgagtacaataacgagaagaggcaaagaataacagtaagggctgtt
gccccagttgattttgctgctgaatctagatatttgctagaagagatctcaaagatgaaa
gattctccatag
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