Hevea brasiliensis (rubber tree): 110650653
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Entry
110650653 CDS
T05150
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110650653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110650653
03012 Translation factors [BR:
hbr03012
]
110650653
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110650653
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110650653
Translation factors [BR:
hbr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110650653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
Rad17
AAA_19
NPHP3_N
ABC_tran
BEX
Motif
Other DBs
NCBI-GeneID:
110650653
NCBI-ProteinID:
XP_021661411
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSRRPNFQGGRRGGGGGSSSSAPGRGGGGRGGGGGGGGRGRGEQRWWDPVWRAERLRQKA
VEMEVLDENEWWNKMEKMKNGGDQEMIVKRNYSRDDQQTLSDMAYQLSLYFHAYNKGKTL
VVSKVPLPNYRADLDERHGSTQKEIRMSTETERRVGNLLNSSQRAAPADSAAASGQADRQ
PSSGLKITKPVSTSEPDSAKEKLSIELKQRQDKMMASNCVKELQSFRQKLPAFKVKGEFL
KAVSENQVLVISGETGCGKTTQLPQYVLDEEIASLRGADCSIICTQPRRISAISVAARIS
SERGENLGETVGYQIRLEAKRSAQTRLLFCTTGVLLRQLVQDPDLTGVSHLLVDEIHERG
MNEDFLLIILHDLLPRRPDLRLILMSATINANLFSKYFGNAPTIHIPGLTFPVTELFLED
ILEKSRYKIQSEAGNFQGNSRRRRRREQDSKKDSLTELFEDVDIDSKYKNYSASTRLSLE
AWSGSPLDLGLVESAIEFICLHEGDGAILVFLTGWDEISKLLDRIKGNKLLGDQSKFLVL
PLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNK
LACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKIIHDAMLQYQLPEILRTPLQELCLH
IKSLQLGAVGSFLAKALQPPDPLSVQNAIELLKTIGALDDNEELTPLGRHLCTLPLDPNI
GKMLLMGSVFQCLNPALTIAAALAHRDPFVLPIDRKNEADAAKRSFAGDSCSDHIALVKA
FEGYREAKRNRNERAFCWENFLSPITLQMMEDMREQFLNLLTDIGFVDKSRGAGAYNQYS
HDLEMVSAILCAGLYPNVVQCKRRGKRTAFYTKEVGKVDIHPASVNAGVHLFPLPYMVYS
EKVKTSGIYIRDSTNISDYALLLFGGSLIPSNQGEGIDMLGGYLHFSASKSVLELIRKLR
AELDKLLWRKIEDPSLDISAEGKGVVSAVIELLHSYNVRY
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgtcctaacttccagggcggccgccgaggtggcggcggcggcagcagtagt
agcgcacctggtcgcggtggcggaggacgtggaggaggaggaggaggaggaggacgagga
cgtggtgagcagcggtggtgggacccagtgtggcgagcggagcgcttgagacagaaagcc
gttgagatggaagttcttgatgagaatgaatggtggaataagatggagaaaatgaagaat
ggaggagatcaggagatgattgtaaagcgtaattacagtcgtgatgaccagcaaaccctc
tctgacatggcttatcaattgagtctttacttccatgcatataataaaggcaagactctt
gtggttagcaaagttccgttgccaaattatcgggctgatcttgatgagcgtcatggatcc
acacagaaagagatccgaatgtctactgagactgagaggagagttggaaatcttttgaac
agctcgcagagagcagcacctgctgactctgctgcagcatctggtcaggcggacagacaa
ccatcaagtggtctaaagataacgaaacctgtatctacctcggagccggattctgctaag
gagaaactcagtattgaattaaagcagaggcaggataaaatgatggcaagtaattgtgtg
aaggaattgcagtcttttaggcaaaagctccctgcattcaaagtgaaaggcgagtttctg
aaagctgtttctgaaaatcaggttttagttatttcaggagagacgggttgtggtaaaaca
acacagctacctcaatatgtattagatgaggagatagcaagtctgcgtggcgctgactgc
agcataatatgcacacaaccccgtcgtatatctgccatatctgttgcagctcgaatatca
tctgaacggggagagaatcttggtgaaactgttggttatcagattcgcttggaggcaaaa
cgttctgctcaaacacgactcctattttgcaccactggtgttttactccggcagttggtt
caagatccagatttgactggtgtaagccatttgttagtagatgaaattcatgaaaggggc
atgaatgaggactttttgttaattattttgcatgaccttctccctcggcgtccagattta
cgtcttattctaatgagtgcaaccatcaatgccaacttgttctcaaaatactttggaaat
gccccaactattcatataccgggattgactttccctgtgactgagttatttctagaagac
atattggagaaatctcgttataaaatccaatcagaggctggcaactttcaggggaattca
aggaggaggaggaggagggagcaagattccaagaaggattctttgactgaattatttgag
gatgttgatattgattctaaatacaagaattacagtgcatctactcgactttctcttgaa
gcttggtctggttcaccgcttgacttgggtctggtggagtcagctattgaatttatttgt
ctccatgaaggggatggtgcaattcttgtatttcttacaggctgggatgagatttccaag
ctacttgatcggattaaaggaaacaaacttttgggagaccaaagcaagtttttagtcctt
cctctacatggttcaatgcctaccatcaaccaacgtgaaatatttgatcgtcctccccct
aacaagcgaaaaatagttcttgcaaccaatattgcagagagtagtatcaccatagatgat
gttgtgtatgttgtagactgtggaaaggcaaaggaaaccagttatgatgctctaaacaag
ctagcttgtctattaccatcatggatttcaaaggcttcagcacatcagagacgaggtcga
gctggccgtgtgcaacctggagtttgttatagattgtatccaaaaattatccatgatgca
atgcttcagtatcagttgcctgaaattctccgaacacctctgcaagagctatgtctgcac
attaaaagcttacagctaggagctgttggatcatttttggcaaaggcgctccagccacca
gatcctctttctgttcaaaatgctattgaactgcttaaaaccatcggggctttagatgat
aatgaggagcttactccacttggtcgccatctttgtactctgcccctggacccaaatatt
ggaaagatgcttctgatggggtctgtctttcaatgcctcaatcctgctttaacaattgca
gctgctcttgctcatcgtgatccatttgttcttccaatagataggaaaaatgaggctgat
gctgctaaaagatcctttgctggtgattcttgcagtgatcacatcgcacttgttaaagct
tttgaaggatatagggaggcaaaacgtaatcgaaatgaaagagctttttgttgggagaat
tttttatccccaataactctgcagatgatggaagatatgagagagcaatttctcaacctg
ctaacagacattggctttgttgacaaatcaaggggtgcaggagcttacaatcaatacagc
catgacttagagatggtgtcagcaatcctttgtgctgggctttacccaaatgttgtgcag
tgcaaaagaagaggaaagcgcacggcattctacactaaagaagttgggaaagttgacata
catcctgcatctgtaaatgctggggttcatcttttccctctgccatacatggtttatagt
gagaaggtgaaaacaagtggcatttatattcgagactcaacaaatatatcagattatgct
ttgcttctctttggtggtagtcttattcctagcaatcagggggaaggtattgacatgctt
ggaggttaccttcatttctctgcatcaaagagcgtattagagttgatacggaaattgcgg
gcagaacttgataagcttctctggaggaagattgaggacccaagcttagacatatctgcg
gagggaaagggggttgtttctgctgtgattgagttattgcacagttacaatgtacgttac
taa
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