Hevea brasiliensis (rubber tree): 110650864
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Entry
110650864 CDS
T05150
Name
(RefSeq) exosome complex component RRP42-like isoform X1
KO
K12589
exosome complex component RRP42
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110650864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110650864
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110650864
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
110650864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
110650864
NCBI-ProteinID:
XP_021661684
LinkDB
All DBs
Position
Unknown
AA seq
146 aa
AA seq
DB search
MAAILNLHQICHSTVKSSSINTLPVEALQLDWISTSSLPAQIVRSIWAQANGSTRVRIGA
TEFIGSVKAELGRPSALQPDKGKVAVFVDCSLVAEPTFEGRGVEDLSTELSVALQHRLLG
GKSGACAWIDLSCNDEAEGVIIPPFK
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatactgaatctccatcagatttgtcactccaccgtcaagtcttcttccatc
aacacactaccagttgaggcattacagcttgactggatttccacctcatcacttcctgct
cagattgtgcgctctatctgggctcaggcaaatggctcaacacgagttaggataggtgca
acagagtttattggtagtgtgaaggctgagcttggaaggccaagtgcattgcagcctgac
aagggaaaggttgctgtatttgtcgattgtagcctagttgcagaaccaacatttgagggc
agaggcgttgaggacctgtcaacagaactttcagttgctcttcagcatcgtctcctaggt
ggtaaaagtggggcatgtgcttggattgatctatcatgtaatgatgaggcagagggcgtt
atcatcccgcccttcaagtga
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integrated database retrieval system
