Hevea brasiliensis (rubber tree): 110650903
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Entry
110650903 CDS
T05150
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110650903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hbr03041
]
110650903
Spliceosome [BR:
hbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110650903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
PRP4
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR41
eIF2A
Beta-prop_Nup120_160
WD40_like
Motif
Other DBs
NCBI-GeneID:
110650903
NCBI-ProteinID:
XP_021661737
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MEADEENSEPAPAPTPAPAPEEPSAAVPENQTVVQQIPPIITPVVPSFVPPIAPIPPLPP
PAIPRPLAPLPIRPPVLRTPPVSQNGEERTSDSDSDQDDFGPAGTAPGSTGDYEFSEGSR
LAKERKQKIVQEIMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMLM
AKLDAEGQLEKLMKAHEEEEAAASAVTDDAEEEMLQYPFYTEGSKEILDARIHIAKYSIL
RAALRLQRARRKRDDPDEDLDAEIDWALKQAGSLVLDSSEIGDDRPLSGCSFSTDGKLLG
TCALNGVAKIWSMPQVKKVAALKGHTERATDIAFSPVQNHLATASADRTARLWNADGSVL
QTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSRSVYGISFHQD
GSLAGSCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDL
RKKKSLYTIPAHSNLISQVKFEPQEGYNLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVT
SLDISADGRYIATVSHDRTIKLWSSSSNEKDAMDVD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagatgaagaaaattcagagcccgcaccggcaccgacaccggcaccggcaccg
gaggagccctctgctgcagttcccgaaaatcaaactgtagttcaacaaatcccacctatc
attacacctgtagtcccctcatttgtgccacctattgctccaatacctccacttcctcct
cccgcaatccctcgccccttagcgcctctccctatccgcccgcctgttcttaggacgcca
cctgtgtcgcaaaatggtgaagagagaacgagtgactcagattccgatcaagatgacttt
ggccccgccgggactgctccgggatcaacgggtgattatgagttctcggaaggaagccga
cttgcaaaagagagaaaacaaaagattgtgcaggaaatcatgatgaagcggcgagctgct
gctctggcagtgcctactaacgacatggcggtccgagcccgtctccggcggttgggagaa
ccaataacgctgtttggagaacgggagatggagagacgagacaggctaaggatgcttatg
gcgaagctagatgctgaagggcaattggagaaactgatgaaagctcatgaggaggaggaa
gctgcagcttcggcggttacagatgatgctgaggaagaaatgcttcaatacccattttat
accgagggttcaaaagagattttagatgctagaattcatattgcaaagtattcaattcta
agagctgctttgagacttcaacgtgcaaggaggaaaagggatgatccagatgaagattta
gatgctgaaattgattgggcactgaagcaggctgggagcttagtacttgactctagtgaa
attggagatgaccggccactctctggttgttccttctcgactgatggaaaactgctcggt
acctgtgcgttaaatggagttgctaaaatatggagcatgcctcaagtaaagaaggttgct
gccttgaagggacacacagagcgtgcaacagatattgcattttctcctgtgcaaaaccat
ttagcaactgcctctgctgatcgaactgcaaggttgtggaatgctgatggttctgtcctt
cagacatttgagggtcatctagatcgccttgcacggattgctttccatccatcagggaag
tacttgggcactacaagctttgataagacatggagactatgggatgtagatactggtgtg
gaattacttcttcaagaaggtcacagtaggagtgtctatgggatatccttccaccaggat
ggttctttagcaggatcttgtggactggatgcacttgctcgtgtttgggatcttcgtact
ggaagaagtattctggccttggagggccatgtcaagccagttcttggtatcagtttttcg
cccaatgggtatcatttggccactggtggggaagataatacttgtcggatatgggattta
aggaagaaaaaatcattgtataccatacctgcccactcaaatcttatatcacaagtgaag
tttgagcctcaagagggctacaacctggtcactgcatcttatgacatgactgctaaggtt
tggtcaggtcgggatttcaagcctgtcaagacattatcagggcacgaagcaaaagttact
tctttggatattagtgcagatgggcgctatattgcaactgtctcacatgatcgaacgatc
aagctctggtccagcagcagcaatgaaaaggatgctatggatgtagactag
DBGET
integrated database retrieval system
