Hevea brasiliensis (rubber tree): 110651472
Help
Entry
110651472 CDS
T05150
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110651472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110651472
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110651472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
110651472
NCBI-ProteinID:
XP_021662518
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MVEENKLPELKLDAKQAQGFLSFFKTLPYDPRAVRIFDRRDYYTSHGENATFIAMTYYHT
TTALRQLGGGADGLSSVSINKNMFETIARDLLLERTDHTLELYEGSGSNWRLAKSGTPGN
LGSFEDVLFANNEMQDSPVVVALIPNFRENGCTVGLSYIDLTKRIIGLAEFVDDSHFTNV
ESALVALGCKECLLPAETGKSSECRTLHDALTRCGVMLTERKKSEFKTRDLVQDLGRLVK
GSIEPVRDLVSGFEFAPGALGALLSYAELLAGESNYGNYTIRRYNLDSYMRLDSAAMRAL
NVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAFVEDT
ALRQDLRQHLKRISDIERLMRNLEKKRAGLQHIVKLYQSSIRLPYIRSALERYDGQFSSL
IKERYLDPLESLTDDDHLNKFVALVEASVDLDQLENGEYMISPNYDPALSALKDEQESLE
RQIHNLHKQTANDLDLPQDKGLKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD
GVKFTNTKLKKLGDQYQKIVEEYKHCQKELVNRVIQTAATFSEVFESLAGMLSELDVLLS
FADLASSCPTPYTRPDISPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQII
TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQ
EMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVIKAPTLFATHFHEL
TALADEKAESHTKHIVGVANYHVSAHIDSSNCKLTMLYKVEPGACDQSFGIHVAEFANFP
KSVVALAREKAAELEDFSPNAIFSNDTAEKVGSKRKRSCDLEDMSRGAAHAHRFLKAFSD
LPLETMDLKEALHQVSKLKNDLERDAANCRWLKQFF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagaaaacaagctgcctgagctaaagctcgatgctaagcaggctcagggattt
ctctctttcttcaaaaccctaccctatgaccccagggcggttcggatatttgataggcgg
gactattacacttcgcatggtgaaaatgcaaccttcattgcaatgacctattaccatact
actactgctttgcgacaattgggtggtggagctgatggcctttccagtgtgagcattaat
aagaacatgtttgaaacaattgcccgagaccttctattggagagaacagaccatactctt
gaactctatgagggtagtgggtccaactggagactggcgaaaagtgggactcctggcaat
ctaggcagttttgaagatgttttgtttgccaacaacgaaatgcaggattcccctgtggtt
gttgcactcattccaaatttccgtgaaaatggttgcactgttggtttaagttatatcgat
ttaacaaaaagaattattgggttggccgaatttgttgatgatagtcactttacaaatgtg
gagtcagctttggttgctcttggttgcaaggaatgccttttgcccgcagaaactggtaaa
tccagtgagtgtagaacattgcatgatgccctgactagatgtggtgtgatgttgactgag
agaaagaaaagtgagttcaaaacaagggatttggtgcaggatcttggtaggctcgtcaaa
ggttccattgaaccagttcgagatttagtttctggatttgaatttgcacctggtgcttta
ggggcattactttcttatgcagaattacttgcaggtgagagcaattatggaaattataca
atcagaaggtacaatcttgacagttatatgaggctggattctgctgccatgagggctctt
aatgtccttgaaagcaaaactgatgcaaataaaaattttagtttatttggcctcatgaat
agaacatgtacagctgggatgggaaaaaggttgcttcatatgtggctaaaacagcccttg
ctggatgtaaatgaaatcaactctagactggacttggtacaggcttttgtggaagatact
gcccttcgccaagacctaaggcaacatctaaaaaggatctcggatattgagcgactgatg
cgcaatcttgagaagaaaagagctggtttgcagcatattgtaaaactttatcagtcgagt
ataagactcccatacattagaagtgctctggagcggtatgatggacaattttcatcctta
atcaaggaaaggtatttggatccccttgagtcattgactgatgatgatcacttgaataag
ttcgttgctctggtagaagcttctgttgaccttgatcaacttgagaatggggagtatatg
atttcaccaaattatgaccctgcactatctgcactgaaagatgaacaagagtcattggag
cgccaaatacacaatttgcataaacaaactgcaaatgatcttgatcttcctcaagataaa
ggattaaagttagataaaggaacacaatttggacatgtcttcagaattacaaagaaagaa
gagccaaaaataaggaaaaagctgaccacccaatttattgtccttgaaacccgaaaggat
ggagtaaaattcacaaacacaaaacttaagaagttaggggatcagtaccaaaagatagta
gaggaatacaagcattgtcagaaagagctggtcaatcgagtcattcaaactgcagcaact
ttttctgaggtgtttgagtctttagctggcatgctttctgaattggatgtcttactcagt
tttgctgatttggcttctagttgtccaactccctacacaagacctgacatctcaccatca
gatgtgggagatattatattagaagggagtagacatccttgtgtggaagctcaagactgg
gttaattttataccaaatgattgcaaacttgtcaggggaaagagttggttccaaataatc
acagggcctaatatgggtggaaaatccacatttattcggcaagttggtgtgaatattctt
atggcgcaagttggttcctttgttccttgtgacaaggctagtatttcagttcgtgattgc
atttttgctcgtgtgggtgctggtgactgccaacttcgtggagtttctacctttatgcaa
gaaatgcttgaaactgcttcaatactgaaaggagctacagataagtcattgataatcatt
gatgagttaggccgtgggacatcaacttatgatggatttggtttagcttgggctatatgt
gaacaccttgttcaagtgattaaagcacctacattatttgcaacccactttcatgaactg
actgccttagctgatgaaaaagccgagtcccatacaaagcatattgttggtgtggcaaat
tatcatgttagtgcacacattgactcgtcaaattgcaagctgacgatgctttacaaggtt
gaaccaggggcttgtgatcaaagttttggtattcatgttgcagaatttgcaaattttcct
aaaagtgttgttgctcttgctcgagaaaaggcagctgagttggaagatttctcacctaat
gctattttttcaaatgacactgcagaaaaggtgggatccaaacgaaaaagatcctgtgat
ctcgaggacatgtctaggggtgcagctcatgctcaccggtttctgaaagcgttctctgat
ttgccactagagactatggatttgaaggaggctctgcaccaagtaagcaagctgaagaat
gacttggagagggatgcagcaaattgccgctggctcaagcaatttttctag
DBGET
integrated database retrieval system