Hevea brasiliensis (rubber tree): 110651658
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Entry
110651658 CDS
T05150
Name
(RefSeq) coatomer subunit alpha-1-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hbr04131
]
110651658
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hbr04147
]
110651658
Membrane trafficking [BR:
hbr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110651658
Exosome [BR:
hbr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110651658
Exosomal proteins of bladder cancer cells
110651658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
TPR_COPA_B
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_At4g14310
Zn_ribbon_19
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
110651658
NCBI-ProteinID:
XP_021662748
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFAVTSLNQSPRTLSYSPTENAVLICSDVDGGSYELY
VIPKDSIGRGDTVQEAKRGAGGSAIFVARNRFAVLEKSSNQVLVKNLKNEVVKKSGLPIA
ADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAII
IASKKLMHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITK
VSGNTIFCLERDGKTRAIVIDATEYIFKLSLLRKKYDHVMSMIRNSQLCGQAMIAYLQQK
GFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEY
AYQRTKNFERLSFLYLITGNLEKLTKMLKIAEVKNDVMGQFHNSLYLGDVQERVKILENA
GHLPLAYVTAKVHGLEDVAEHLAAELGDNVPSVPEGKVPSLLMPPVPVMCGGDWPLLRVM
KGIFEGGLDNMGRGGADEDEDTGEVGEGDWGGLDIVDEDGLQNGDVTAILEDGEVAEENE
EEGGWELEDLELPPEQDTPRASVSARSSVFVAPTPGMPVSQIWIQRSSLAAEHAAAGNFD
TAMRLLNRQLGIRNFIPLRSMFLDLHSGSHSYLRAFSSTPVISLAVERGWNESASPNVRG
PPALVFNFSQLEEKLKAGYRATTGGKFTEALRVFLSILHTIPLIVVESRREVDEVKELII
IVKEYVLGLQMELKRREMKDNPVRQQELAAYFTHCNLQMPHLRLALQNAMTVCYKARNLA
TAANFARRLLETNPTIENQAKTARQVLQAAERNMTDAAELNYDFRNPFVTCGATYVPIYR
GQKDVSCPYCSSRFVPSQEGKLCTVCDLAVVGADASGLLCSPSQIR
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgaagtttgagacgaagagtaatagagttaagggactgagtttccacagtaag
agaccgtggatccttgcgagtctccatagtggcgtgatccagctatgggactaccgaatg
gggacattaattgataggtttgatgagcacgacgggcctgttcgcggagttcatttccac
aaatctcagcctctatttgtatctggaggtgatgattacaagattaaagtttggaactac
aagatgcataggtgtctgtttacacttcttggacaccttgattacatccgtactgttcag
tttcatcatgagtacccatggatcgtgagtgccagtgatgaccagaccatccgtatttgg
aattggcaatcacgtacttgcatttctgtgttgacgggccacaatcattatgtaatgtgc
gcctcattccatcctaaagaagaccttgttgtttcggcctctctagatcagactgttcgt
gtttgggatattggtgccctgagaaagaaaactgtgtcccctgctgatgacattctgcgc
ttgagtcagatgaacacggatctttttggtggggttgatgctgttgttaagtatgtcttg
gaaggtcatgatcgaggagtgaactgggctgcattccaccccacccttcccttgattgtc
tcaggagcagatgatcgtcaggtgaaattgtggcgcatgaatgacacaaaggcttgggaa
gtggacacattgagaggacacatgaacaatgtgtcatgcgttatgttccatgccaaacag
gatatcattgtttcaaattctgaggataaaagcattcgtgtttgggatgtaactaaacga
actggagttcagactttccgtcgagagcatgaccggttctggatccttgcttctcaccct
gagatgaatctccttgctgcaggtcatgacagcggcatgattgtttttaaattagaaaga
gaacggcctgcttttgctgtaaccagcctgaaccaaagtccaaggacactttcttacagc
cctacagagaatgctgttcttatttgctcagatgtggatggtggatcgtatgagttgtat
gtcatacctaaagacagcattgggaggggtgatactgtgcaggaggcaaagaggggtgct
gggggatctgccatttttgtggctcgaaatagatttgcggtgcttgaaaaaagtagcaac
caagtcttagtcaaaaacttgaagaatgaagttgttaaaaagagtggtctccccattgct
gcagatgcaatattctatgctgggacgggtaacttgctttgcagagcagaggatagagta
gtcatatttgatctccagcaaaggctcgttcttggggatcttcaaacaccttttgtcaaa
tatgttgtttggtctaatgacatggagagtgttgccttactcagcaaacatgccatcatc
attgctagcaagaagcttatgcaccagtgcactcttcatgagacaatccgtgtaaagagt
ggagcctgggatgataatggtgtcttcatttatacaactttaaatcacataaaatactgc
ctgcctaatggggatagtggcataatcagaactcttgatgttccaatatacatcacaaaa
gtttctggaaataccatattttgcttggaacgggatggaaaaactagagctattgtcatt
gatgcaacagaatatatcttcaaactctctcttttgaggaaaaaatatgatcatgttatg
agcatgattaggaactctcagctctgtgggcaggcaatgattgcttatttgcagcagaag
ggttttcctgaagttgctttgcactttgtgaaggatgagagaactcgatttaatttggcc
ctcgagagtggaaatattcagattgctgttgcttcagcaaaggaaattgatgagaaagat
cactggtatagattgggagtggaagcgcttcgccaaggtaatgctggtattgttgaatat
gcctaccaaaggactaaaaattttgagaggttgtctttcctttatctcataactgggaat
ctggaaaagcttaccaagatgctgaaaattgctgaagtcaagaatgatgtcatgggtcag
tttcacaattccctttatttgggtgatgttcaagagcgtgtcaagatcttagagaatgct
ggtcatttgccacttgcttatgtaactgctaaagtacatgggctagaggatgttgctgaa
catctggctgctgagttaggagataatgttccatctgtgccagagggtaaagtgccctcc
cttctgatgcctccagttcctgttatgtgtggtggtgattggccccttctaagagtcatg
aaaggtatttttgaaggtggacttgataatatgggcagaggtggtgctgatgaagatgaa
gacactggtgaagtaggtgaaggtgattggggtgggctggatattgttgatgaggatggc
ttacaaaatggggatgttacagcaattttggaggatggggaagtggctgaagaaaatgaa
gaggaaggaggatgggaacttgaagacttggagcttccccctgagcaagacacaccaagg
gcttcagtcagtgctcgctcttcagtttttgtggcaccaactcctggtatgcctgtaagc
cagatttggatccagagatcatcacttgctgctgaacatgctgcagcaggcaattttgat
actgctatgcgattgctcaacaggcaacttggaattcgaaatttcattcctttgagatcc
atgtttctggatcttcattcaggtagccattcatatttgcgtgcattttcatctactcca
gtgatatcactggctgttgaacgaggatggaatgagtctgctagccctaatgtgaggggc
cctccagcgttggtattcaatttctcacagttggaggagaagctgaaggctggttacaga
gccacaacaggagggaaattcacagaggcacttagagtctttctcagcattcttcacaca
attcctttaattgttgttgaatcaaggagagaggttgatgaagtcaaggaattgattata
attgtcaaagagtatgttctaggtctgcagatggagcttaaaaggagggaaatgaaagac
aatccagtccgccaacaggagctagctgcctacttcacccactgcaaccttcagatgcct
catttaaggcttgctttgcaaaatgcaatgactgtttgctacaaggcaaggaaccttgct
actgcagctaactttgccaggcggcttttggagacaaaccccacaattgagaaccaggca
aagaccgccagacaagtgttgcaagctgcagaaaggaatatgacagatgctgctgagctg
aattacgattttagaaacccatttgtgacatgtggtgcaacttatgttccgatttaccga
ggacaaaaggatgtctcttgcccatattgtagttcacggtttgtgccaagccaagaaggg
aagctgtgtactgtttgtgatcttgcagttgttggagcagatgcttcagggttgctctgt
tctccttcccagatacgatga
DBGET
integrated database retrieval system
