Hevea brasiliensis (rubber tree): 110652198
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Entry
110652198 CDS
T05150
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110652198
Transcription machinery [BR:
hbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110652198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PagP
Motif
Other DBs
NCBI-GeneID:
110652198
NCBI-ProteinID:
XP_021663446
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MKNRWWRVDNSFNATIYFLAIKYQPLSLDGLSFSAFFSPENNTKMGVGFRPSVKCGFPIR
SVFNSPSRLPSSSVKGREASFNLTRLSFLSVISEEGDILYRDPCKAYAYSPAMQILENGH
SQVEGAKTIFDKGSHNTIDDAEVLSVKYDIRVPSSSSKEKNSRFCLLLENLNILEESFAD
SDALNLERDILLQLGRLGALKLFNTCLRRTLADVPTENIGECKINNASNDLVNEVIIRSG
KKQERKSRRERASSKFGHLAYSLSLPSEHIQNGPGKPIFSSAKKASNFKSRRLIIARNEA
EMSRGVKMVSELEKIRTTLEEETGRVVSWSCWAEAAGLDMKELQQQVRFGWYCRDELIRS
TRSLVLYFARNYKGMGISLEDLLQAGNLGVLQGAERFDHTRGYRFSTYVQYWIRKSMSKT
VTRHARGIQIPCILSRAINQIQKARKALSTSYGKHADDSEIAKFTGLSLAKIESASKCPR
VVGSIDKKIGDGLNAKYLEFMSDMSIQSPEEAVMRQHMIKDIHDLLRGLESRERQVLILR
YGLKDHQPKSLEEIGKLFHVSKEWVRRLEKKVMTRLRSEETCRNLRHYMNS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccggtggtggagagttgacaactcattcaatgccactatttattttcttgct
atcaagtatcaacctttaagccttgatggactctctttctctgcattcttttcgccggag
aataataccaaaatgggtgtgggttttaggccaagtgtcaagtgcggttttccaattcgc
tctgtcttcaattcaccatccaggctcccttcttcttctgttaaaggcagggaggcttct
ttcaacctgacgaggctctcttttctgtctgttatttctgaagagggtgacattttgtat
agagatccttgcaaggcttatgcttattcacctgcaatgcaaatcttagagaatgggcat
tctcaagtggaaggagctaagacgatttttgataaaggatctcataacacgattgatgat
gctgaagtgttgtctgttaaatatgacattcgtgttccctcttcaagctcaaaagagaag
aattcaaggttttgtttgttattggaaaatcttaatatcttagaggagtcttttgctgat
tctgatgcactgaatttggaaagggatattctgctacaattaggaagacttggagctcta
aaattattcaatacatgcctgaggaggacccttgctgatgttcctactgaaaatattgga
gagtgtaaaattaataacgcatcaaatgatcttgtaaatgaagtcattatccgttctggg
aaaaagcaagaaagaaaatctagaagagaaagagcctcctcaaaatttggccatcttgct
tattctttgtcattgccttcagaacacattcaaaatggtcctggaaagcctattttttcc
tctgctaaaaaagcatcaaatttcaagagtagaagattgataattgctagaaatgaggcg
gaaatgtccaggggagttaagatggtttcagagttggagaagatcagaacaactttggaa
gaggaaactggacgagttgtcagttggagttgctgggctgaagcagctggacttgacatg
aaggagctacagcagcaggtgcgttttggttggtattgcagagatgagctcatcaggagc
actcgctctttagttctgtactttgccagaaattataagggtatgggaatatccttggaa
gatttacttcaggcaggaaatctgggtgtcttgcaaggtgcagaaagatttgatcacaca
aggggatacagattttcgacatatgtacagtactggataaggaaatcaatgtcaaagact
gtgacacgacatgctagagggattcaaattccttgcatattaagcagggcaataaaccag
atacaaaaagctcgaaaagcccttagcaccagctatgggaaacatgcggatgacagcgaa
attgccaagttcacgggtctttctttggctaaaattgaatcagctagcaaatgccctaga
gttgtgggttcaattgataagaaaattggagatggtctcaatgcaaaatatttggaattt
atgtctgatatgtcgatacagagccctgaagaagctgtcatgaggcaacacatgataaaa
gacatacatgatctcttaagaggcttggaatcaagagaaaggcaagtgttaattcttaga
tatgggcttaaggatcatcagcccaaatcacttgaggagattgggaagcttttccatgtg
agcaaggaatgggtaaggaggttagagaagaaagtaatgacaagacttaggagtgaagaa
acttgcagaaatttaagacattatatgaattcatag
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