Hevea brasiliensis (rubber tree): 110652442
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Entry
110652442 CDS
T05150
Name
(RefSeq) general negative regulator of transcription subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110652442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110652442
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110652442
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110652442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
110652442
NCBI-ProteinID:
XP_021663733
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKQIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDSFESEIEGLSVKKGKTRPPRLTHLETSIVRHKA
HIMKLEWILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVTIGTPGLVKVAPVHSLKTSLAASASQMPATATSTHQQATLVQEQADDTASQDSNP
DIVARTPPAKSSMIGSSAASIPTVNHATPVSVGVPAHTLSSVSASSILPGASSVQGVLEN
AAAAIPSSPATTGNSVKEEEIAGFPGHRPSPALADTGLVRGIGRGSLSSHPSSSIPLSSG
GVPSNGSLGALPSPSDVTKRNILSTDDRLGSSGLVQPLASPLSNRMILPPTGKTNDGTGM
VDSSNVGEAPAIGGRVFSPSLVPGMQWRPGGSFQNQNELGQFRARTEIAPDQREKFLQRL
QQVQQQGHSTLLGMPPLAGGNHKQFSAQQNPLLQQLNSQSSSVSSQASLGLGVQAPGLNT
VTSSALQQPNSFHQQSSQQVVISNSAKDADVGHLKAEEQQQQALNLPDDSTPESAATSGL
SKNLVNEDELKAPYAMDTPTGASASLAEPVQVPRDIDLSPGQPIQSSQPSTDLGVIGRRS
VSDLGAIGDNISGSAVNSGAMHDQLYNLQMLEAAYHKLPQPKDSERARSYTPRHPAATPP
SYPQVQAPIVNNPGFWERLTIDSYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKY
NTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDEL
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaagccgcaagcttcaaggcgagattgatcgcgttctgaagaaggtccaagaa
ggcgtcgatgtctttgacagcatctggaacaaggtttatgatacagacaacgcaaatcag
aaagagaaatttgaggcggacttaaagaaggagataaaaaagctgcagaggtacagggat
caaatcaaaacatggattcaatctagtgagatcaaggataagaaggttagtgcctcttac
gagcaggctttagtggatgctcgtaagcaaattgagcgtgaaatggagagatttaagatc
tgcgagaaggaaacaaaaacaaaggcattttctaaagaagggctgggccaacaaccgaaa
actgatccaaaggagaaggctaaatcagaaacaagggattggttaaacaatgtggttgga
gagttggaatcacagattgatagctttgaatctgaaattgaggggctatctgttaagaaa
gggaagacaagaccacctagattgacgcatttagagacatctatcgtgcggcacaaggct
catattatgaagttagaatggatcttgaggctactggataacgatgaattgagtcctgag
caggtcaatgatgttaaagacttcctggacgactatgtggaacgtaatcaggaggacttt
gatgaatttagtgatgttgatgagctttacagctcattgccattggacaaggtggagtct
cttgaagatcttgttacaattggtactcctggtcttgtcaaggttgcaccagttcacagc
ttgaagacatctttagcagcttcagcatctcaaatgcctgcaactgccacgtctactcat
cagcaggctactttggttcaggagcaagctgatgatacagcttcacaggatagtaatcct
gacattgttgcaagaactccacctgccaagagtagcatgattggttcttctgcagcttca
ataccaactgtgaatcatgcaactcctgtttctgtcggtgttccagctcatacattatct
agtgtatcagcctcttcaattcttccaggtgcaagttctgttcaaggtgtactggaaaat
gcagctgctgccattccttcatctcctgcaacaacgggaaattctgtgaaggaggaagaa
attgcaggtttccctggccatagaccgtcaccagctcttgctgatactggactagttagg
ggcattggtagaggtagcctctctagtcatccttcatctagtatccctcttagttctggt
ggagttcctagcaatggatcactcggtgcactaccttcaccatcggacgttacaaaaaga
aatattttatcaacagatgatagacttgggagtagcggactggtgcaacctttggcttcc
ccactaagcaatagaatgatcttgcctccgactggcaagactaatgatggaacaggtatg
gttgactctagtaatgttggtgaagctcctgcaataggtggaagagttttttccccttct
ttggtccctggcatgcagtggagacctggaggttcctttcaaaatcagaatgaactggga
caatttcgtgcaagaactgaaatagcacctgatcagagggagaaatttttgcaacgtctt
cagcaagtccagcaacaaggccacagcacccttcttggtatgccaccacttgctggtgga
aatcataaacagttttctgcccaacaaaaccccctattgcagcagttaaattctcaaagc
tcatctgtctcttctcaagctagtctgggacttggcgttcaggcacctggtctcaatact
gttacatcttctgccttacagcagccaaactccttccatcaacagtctagtcaacaagtt
gtaatatcaaatagtgcaaaagatgcagatgttggtcatttgaaagccgaggagcagcag
caacaagctctgaatttacctgatgattcaactcctgaatctgctgctacatccgggctg
agcaaaaatcttgtgaatgaggacgaattgaaagccccatatgcaatggatactcctaca
ggagcatctgcttctttggcagagccagtccaagtgccaagagatattgatctctctcct
ggacaaccaatacaatctagtcaaccttctactgaccttggtgttattggtaggagaagt
gtctctgaccttggtgccattggagataatattagtgggtctgctgtgaattctggggcc
atgcatgatcaattgtacaatttgcagatgcttgaggctgcatatcacaaacttcctcag
cctaaagattcagaacgtgctaggagctatactccgaggcaccctgcagccacacctccc
agctatcctcaagttcaggcgcccattgtaaataatcctggattctgggaacggctaacc
attgatagttatggcactgatactttgttctttgcattttattatcaacagaatacctat
cagcaatatttggctgcaaaagaactaaagaaacaatcctggagatatcacagaaaatac
aacacttggtttcagcggcatgaggaacccaaagtggcaactgatgaatatgaacaaggg
acttatgtttactttgatttccatattgccaatgatgacctccaacatggatggtgtcaa
agaatcaagactgagttcactttcgagtacaactatcttgaagatgaattataa
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