Hevea brasiliensis (rubber tree): 110652729
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Entry
110652729 CDS
T05150
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hbr03041
]
110652729
03009 Ribosome biogenesis [BR:
hbr03009
]
110652729
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110652729
Spliceosome [BR:
hbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110652729
Ribosome biogenesis [BR:
hbr03009
]
Eukaryotic type
90S particles
Helicases
110652729
Pre-60S particles
110652729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110652729
NCBI-ProteinID:
XP_021664045
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MLAMGALPSPHPLKNLRPQIIGSHSHSCVFFSFDLKSSKRVFASNTPFQAVPELDDADGT
CSHLPNQDDKDASPGIVSTTKSASPTPSSFRKLKAHKLKVLMKRSSLVKEKTYGETMVTG
MREDTKTSNAYFKHGEHQMLDYEIMQDDSQRSFPKRAGPKRSAPAGSSYSRGWGNVGHVH
SLKSKSTKPLQQQQIFSADNDFFSRKSFKDLGCTCFMIESLKGQFFVRPSHIQAMAFTPV
IEGKSCVIADQSGSGKTLAYLVPIIQRLRLEELQGLGESVSKSPQVLIMVPTAELASQVL
NNCRSISKFGVPFRSMVATGGFSQRTQLENLEQGVDILIVTPGRFTFLVKEGFLQQTNLK
CVVLDEVDILFNDEDFEVALNSLMNSSPVVTQYLFVTATLPVDVYNKLVEIFPDCEVIMG
PGMHRTSTRLEEVLVDCSGEIGTERTPDTAFLNKKSALLRIMEQSPVSKTIVFCNKIETC
RKVENVLKRFDRKGTNIRVLPFHAALAKESRLANMTEFMNSPPGENSLFLVCTDRASRGI
DFTGVDHVILFDFPRDPSEYVRRVGRTARGATGKGKAFVFGVGKQVSLAQRIIERNRKGH
PLHDVPSAYELMS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaatgggtgctcttccttctcctcatcctctaaaaaacctgaggcctcaaatc
attggctcccacagtcacagttgcgtattcttcagttttgatttgaaaagcagtaaaagg
gttttcgcttccaacactccctttcaagctgttccagagctcgatgatgctgatggcact
tgctcccatcttccgaaccaggatgacaaagatgcttctccaggcattgtaagtaccaca
aaaagtgcttctccaacgccttctagtttcagaaaactgaaagcacacaagttaaaagtt
ctaatgaaaagatcttcactggtgaaggaaaagacttatggagagacaatggtaactggg
atgagggaggacacgaaaacttcgaatgcttatttcaaacacggtgaacatcagatgttg
gattatgaaattatgcaagatgattctcaaagatctttccccaaaagagctggaccaaaa
cgttcagctcctgctggttcttcttactcaagagggtggggcaacgtaggtcacgttcat
agtctcaaatccaaatcaacaaaacctctgcaacaacagcaaatattttctgctgacaat
gacttctttagtagaaaatcatttaaagatttgggatgcacttgctttatgattgaatct
ttgaaggggcagtttttcgtacgcccttcacatattcaggccatggcatttacacctgta
attgaagggaagagctgtgttatagcagatcaaagtggatcaggaaagacattggcatat
ctggtacctataattcaacgcctcaggctagaagaactccaaggacttggtgaatctgtt
tcaaaaagtcctcaagtacttatcatggtgccaactgctgagctggcatctcaggttttg
aataattgccggtcaatatcaaaatttggggttccatttcgatctatggttgcaacgggt
ggattttctcagagaactcaactggaaaatctagaacaaggtgttgacattctaatagtg
acgcctggacgtttcacattcctagttaaagaaggattcttacagcaaacaaatctgaaa
tgtgttgtgttggatgaggtcgatatactgtttaatgatgaggactttgaggttgcatta
aacagcttgatgaattcttcaccagttgtcacacaatatcttttcgttactgcaacttta
ccagtcgatgtttataacaagcttgttgagatctttcctgattgtgaagtgatcatggga
cctggtatgcatcgcacaagtaccaggcttgaagaggttcttgtggattgcagtggagaa
attgggacagaaaggacacccgatacagcatttctcaataagaaatcagctcttctgcgg
attatggagcaaagtcctgtttccaagacaattgtgttttgtaacaagatcgagacatgc
agaaaagtagagaatgtattaaaacgctttgacagaaaaggaacaaatattcgagttcta
cctttccatgctgcactggcaaaagaatcaaggcttgcaaacatgacagagttcatgaat
tctcctccaggagaaaactctttatttttggtttgtacggatagagcatcacgtggaatt
gattttactggtgtggatcatgttatactctttgattttccacgtgatccaagtgaatat
gtgcgtcgagttggaagaactgctagaggtgccacaggaaagggcaaggcatttgtcttt
ggggttgggaagcaagtttccctcgcacagaggataattgagagaaacagaaaaggtcac
ccattgcatgatgtgccatctgcttatgagcttatgagttaa
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