Hevea brasiliensis (rubber tree): 110653631
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Entry
110653631 CDS
T05150
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110653631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110653631
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110653631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
110653631
NCBI-ProteinID:
XP_021665047
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MAPARKPSNGRSPLVNPQRQITSFFSKATSPSPLPASTLSKEQTPKYNPNPKPPSPSPST
PSPLQTKIKKPRLVIGQTPSPSPSPSLSTPATTTKSYDKEVVDKRIRVYWPLDKRWYEGC
VKVYDKDSGKHLVQYDDFEEEMLDLGMEKIEWVEETVKKFKRLRRGSLAFKKTVIEDENE
EMKDVCNVEEENDGDDSSDEDWGKNPEMDLSDEDDMELEDEEEEDNIKVDKKEKQSGKSE
SRKRKACGAGKLGCGKKSEVVGDVSKEELKVSIMEQVKTEGTGLSNGLGDALTSDASERF
SARETEKLWFLGAERTDAKRRRPGDANYDPRTLYLPPNFVKSLSGGQRQWWEFKSKHMDK
VLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPERNFSMNVEKMARKGYRVLVI
EQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLTANPDASYLMGVTESRQN
LENKNFERVFGICVVDVATSRILLGQFEDDAECSSLCCLLSELRPVEIIKPAKMLSSETE
RVMLRHTRNPLVNELVPISEFWDSEKTVCEVKAIYKRITGQSAPGFLNKADTDTAELHVA
EDGSSCLPDILSELVNKGENGSLALSALGGTLYYLKQAFLDETLLRFAKFESLPCSDFCN
VAQKPYMILDAAAMENLEIFENNRNGGSSGTLYAQMNHCVTAFGKRLLKTWLARPLYHLK
SIKDRQDAVAGLRGANQPMALEFRKALSRLPDMERLLARICASSEANGRNSNKVILYEDA
AKKQLQEFITALRGCELMAQACSSLCVILESVESRQLHHLLTPGEGLPDIHSILKHFKDA
FDWVEANNSGRIIPHDGVDLEYDSACKKVREIESSLTKHLKEQRKLLGDTSISYVTVGKE
AYLLEVPEHLRGSIPRDYELRSSKKGFYRYWTPSIKKLLGELSQSESEKESTLKSILQRL
IGRFCEHHDKWRQLVSTTAELDVLISLAIASDFYEGPACRPVIMGSSSSEVPQISAKSLG
HPVLRSDSLGKGAFVPNDISIGGSDGASFVLLTGPNMGGKSTLLRQVCLAVILAQVGADV
PAGSFELSPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVALDELGRGTS
TSDGQAIAEAVLDHFVHEVQCRGMFSTHYHRLAVDYQKDPKVSLCHMACQVGTGVGEVEE
VTFLYRLMPGACPKSYGVNVARLAGLPDSILEKAAAKSREFEAVYGKHRNTSDEMVVFIQ
NLIDVAANLSCHSFDSNLFNKLQHRARVLLQQN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggcgcgtaaaccaagcaatggcagatcaccgctggtcaatccacagcgccaa
atcacttcttttttctctaaagcaacctctccttctccacttcccgcctctactctctcc
aaagaacaaacccccaaatataaccctaaccctaaacctccgagccctagcccttctact
ccttctcctctacaaaccaaaataaaaaaaccacgcctagtcattggccaaacgccctcc
ccatctccatcgccgtctctgtcaacacctgcaaccaccactaagtcgtacgacaaagag
gtggtggataagagaattagggtttactggccgttggataagagatggtacgagggttgc
gttaaagtttatgataaggattctggtaagcatttggttcagtatgatgatttcgaagag
gagatgttggatttgggaatggaaaaaattgagtgggttgaggaaactgtgaagaaattt
aagcgcttacgaaggggttctttggctttcaagaagacagtgattgaagatgaaaatgaa
gagatgaaagatgtctgtaatgttgaagaagaaaatgatggtgatgattctagtgatgaa
gattggggaaagaatccagagatggacctcagtgatgaggatgatatggagttggaggat
gaggaagaagaggataatatcaaggttgacaaaaaagaaaagcagagtgggaagagtgaa
tcaaggaaaaggaaggcctgcggagctggaaagctgggttgcgggaagaagagcgaggtt
gttggggatgtgagtaaagaagaattgaaagtttcaattatggagcaagtgaagactgaa
ggaactgggttgtctaatggccttggtgatgctttgacaagtgatgcttctgaaaggttc
agcgcacgtgaaactgagaaattgtggtttcttggagcagagcggacggatgcaaaaagg
aggcgccctggagatgcaaattatgatccaaggactttgtacctgcctccaaattttgta
aagagtttatcaggtggtcagaggcaatggtgggagttcaaatcaaagcatatggataaa
gttttgtttttcaagatgggcaagttttatgagctttttgaaatggatgcccacatagga
gctaaggaattagatttgcaatatatgaagggagaacaaccacattgtggttttccagag
aggaacttctcaatgaacgtggagaaaatggcaagaaagggttatcgagttcttgttata
gagcagacggaaacacctgaacaactggaacttcgtcgcaaagagaaaggttctaaagac
aaggttgtgaaacgtgaaatatgtgcagtggttacaaaaggaacactaactgagggagaa
ttacttacagcaaatcctgatgcttcttatctaatgggagtgactgaaagccgtcagaat
ttggaaaacaaaaattttgagcgggtttttggtatctgtgtggttgatgttgctaccagc
agaatccttcttgggcagtttgaggatgatgcagaatgcagctcattgtgttgtctgtta
tctgagctgaggccagtagaaattataaaacctgcaaaaatgctcagctctgaaactgag
agagtaatgttaaggcatacgagaaatcctttagtaaatgagttggttcccatctcagaa
ttctgggattctgagaaaactgtttgtgaagtcaaggccatctacaagcgtatcactggt
caatcagctcctggatttttgaataaagcggatacagatacagcagaacttcatgttgca
gaagatgggtcaagctgcctgccagatattttgtcagagctagtaaataaaggagaaaat
ggcagcctagcactttcagctcttggaggaactctctattatctaaaacaggcttttctg
gatgagactttgcttagatttgcaaagtttgaatcacttccatgctctgatttctgcaat
gttgctcaaaaaccatatatgattcttgatgctgctgcaatggagaatcttgagatcttt
gagaataacagaaatggaggctcttcagggacactttatgcacaaatgaatcattgtgtg
acagcatttgggaagaggttgctgaaaacatggctagcaagacctctatatcatttgaaa
tctattaaggatcgccaggatgctgtagcaggtctacggggggcaaatcaacctatggca
ctggaatttcgaaaagcattgtccaggcttcctgacatggagcgattacttgcacgcata
tgtgctagcagtgaagctaatggaagaaattcaaataaggtaattttatatgaggatgca
gcaaagaagcagctccaggagttcataactgctctacgtggctgtgaattaatggcccaa
gcatgttcctcactttgtgtcattttggaaagtgttgagtctaggcaactacatcatttg
ttaacacctggtgaaggtcttcctgatatccattcaattcttaaacattttaaggatgcc
tttgattgggtggaggccaacaattctggacgtataatacctcatgatggagtagatctg
gagtatgactctgcttgtaaaaaagttagggaaattgagtcgagtttgacaaaacacctt
aaggaacagcggaagttacttggagacacatcaatcagttacgtcacagttggaaaagag
gcatatctattagaagttccagaacatttgcgagggagtattcctcgagattatgagttg
cgttcatccaaaaagggattttacaggtattggactccaagcattaagaagctcttagga
gagctctcacagtctgaatctgaaaaggagtcaacattgaagagcattttgcagagattg
atagggcgtttctgtgaacatcatgataagtggagacaactggtttcaacaacagcagaa
ctggatgttttgattagtttggcaattgcaagtgacttttatgaagggccagcatgccgt
ccagtcatcatgggttcatcgtcaagtgaagtgccacagatatctgcaaaaagtttgggt
caccctgttcttagaagtgattctttaggcaagggtgcatttgtgccaaatgacatcagt
attggtggtagtgatggtgccagctttgtccttctgactggtcctaacatgggtggaaag
tctactcttctccggcaagtttgtttagctgtgattttggcccaggtaggggctgatgtc
cctgctgggagctttgaattgtcacctgtcgaccgaatatttgtccgaatgggtgcaaaa
gatcatattatggcaggtcaaagtacattcttgacagagctttcagaaactgcattgatg
ctgtcatcggccactcgtaattcattggtggcactggatgaacttggacgtggcacatca
acatcagatggacaagcaatagcggaagcagtacttgatcattttgtccacgaggtgcag
tgtcgaggaatgttttcaactcactatcatcgattagctgtagactatcagaaagatccc
aaggtctcactctgccacatggcatgtcaagttggaactggggttggagaagtggaggaa
gttacatttctatataggttgatgcctggtgcatgccctaaaagctatggtgtcaatgta
gcaagactggctggactccctgattctatactagaaaaagctgctgcaaaatccagagaa
tttgaggctgtatatggcaaacacagaaatactagtgatgagatggtagtcttcatccaa
aatttgattgatgttgctgcaaacttgagttgccatagttttgatagcaacttgttcaat
aaacttcagcatagagccagggtacttctgcagcaaaattga
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