Hevea brasiliensis (rubber tree): 110654729
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Entry
110654729 CDS
T05150
Name
(RefSeq) endoribonuclease Dicer homolog 3 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbr03036
]
110654729
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110654729
microRNA pathway
RISC loading complex
110654729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
DEAD
ResIII
Helicase_C
PAZ
SNF2-rel_dom
SWI2_SNF2
DND1_DSRM
AAA_22
SLFN-g3_helicase
DUF5466
Motif
Other DBs
NCBI-GeneID:
110654729
NCBI-ProteinID:
XP_021666513
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
MADLNPLKRSFSDMSNSLESLDFGLNGLEHRDSAIQEPASVVNPNNSSDDLGLNCLEDAA
IQEPVSLINSKDFNPRSYQLKVFEVAMKRNTIAVLETGAGKTMIAVMLIKEIGQAIKFTD
HKKLILFLAPTVHLVNQQYEVIKANTSFDAGAYYGAKGVDGWTLKLWEKEIDEHDVLVMT
PQILLDALRKAFLNLDMVSLMIIDECHRATGNHPYTKIMKEFYHKLSNKPKIFGMTASPV
VRKGVSSTMDCEDQISELESILDSQVYTIEDRTEMDIHVPSARETCRFYDKAQCYSSELK
SKIEASWSKFDASMLSLQGSIQSGYKDIDDKIRTLRQRLSNDHAKILNCLEDLGLICAYE
AVKVCLQSAPNSTEDCVIYREISLQHRYFLEEVLSLIGESLPHCDNFLLDLDFDFLKAVV
FGYISPKLYELLQLFLSFGGARQILCLIFVDRIVTAKVIERFVKKVAVLAHFTVSYVTGT
NTSVDAVTPKTQKETLESFRSGKVNLLFSTDVLREGIHVPNCSCVICFDLPKTVCCYVQS
RGRARQNDSEYIIMLERGNVKQRDQLFDFIRSEWLMTNTTINRDPDVQSLKTCAAEETKA
YIVNATGASVTADSSVNLIYRYCEKLPGDRYFTPRPTFEFEVFEQSCQCKIKLPASAAFQ
TLVGPICRSQQLAKQLVCLEACKKLHQMGALDDHLRPSFDDPMEDNCIMRSKETLAGAGT
TKRKELHGTTGIHALSGSWGENLDGTTFYAYKFDFSCSIATEMYSGFILLIESKLDDDVG
NVELDLYLVRKIVRASVSSCGQVHLDAEQMMKAKCFHELFFNALFGKLFTGSKSSKTREL
LLQKEKSLFWIPSNMYLLLPLETFSASNDESWKINWSGVDSCTYVVEFLKNSFLGAEQCN
GESRRSSSCRVGSSVTECSGVNTIHFANFSVDADKLKDVVVLAIHTGKIYSVIEVVSDMS
AESPFEQNAGDAPSNYSSFTEYFNKKYGIVLMHPGQPLLLLKQSHKPHNLLPNPNDEVTS
KDGMAVVKQRQFVHMPPELLVSIDIPVQTLKSFYLLPSLMYRLESLMLASQLRQEIDCRI
PDCYIPSSLMLEAITTLRCSETFSMERLELLGDSVLKYAISSDLFLRYPTKHEGQLSARR
IQAVCNSALHKLGISLKLQGYIRDSAFNPRCWVAPGQRPAYYIPCKCGVDTLEVPLDAKF
QTEDPKIKIAICCSMGHRWICSKTISDCVEAILGAYYVSGGLIAAVHVMKWLGMDIEYDP
SLVDEAISSASLRSYMPKENEVTSLESKLGYTFSVKFLIQEAMTHASMQEQGVGYCYQRL
EFLGDSLLDLLITWHLYQSHTNIDPGELTDLRSACVSNENFAQIVVRRELYKHLQHCSTL
LLSQITEYLESFCESDEATKLSTVPKGPKALGDLLESIAGAMLVDTKFDLDEVWRIFKPL
LSPIATPESLELPPLRELIELCDSHGYFIKERCTIKNDIVHAHLRLQLNDVLLVGDGYDR
NRKTAKGKAASHLLKELENRGIRYSRGDSKRKQDPDHVVDSSSLDLTNAHTCEPKNHKKQ
KKVENESPTGSSGVPSLVGSPKEGLPVIESINMKKGGPRTTLFELCKKGEWTRPTFQTTE
TKSRTPIIFGEGSERRESFISFISKITLNIPFYGIIECAGDPRPDKKSSFDSAALAMLYE
LKELGRLIIVDAQ
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccttaatcctctcaagagaagcttcagtgacatgagcaactcactagagtct
cttgattttggtttgaatggtctggaacatcgagattctgctatccaagaaccagcttct
gtagtcaatcccaacaactcatctgacgatttgggtttgaattgtctggaagatgctgct
atccaagaaccagtttctttaatcaattctaaggacttcaatcccagaagctaccaattg
aaggttttcgaggtggctatgaagaggaacactatagcagtgttggagactggtgctgga
aaaacaatgatcgcagtaatgctgattaaagaaattggtcaagctatcaagtttactgac
cataaaaaattgattcttttcttagcgccaacagttcatcttgtcaaccagcaatatgag
gttattaaagcgaatacaagctttgatgcaggagcgtattatggagccaagggggtagat
ggatggactttgaagttatgggaaaaggagattgatgagcatgacgtattggttatgaca
cctcaaatccttttggatgctttaagaaaggcattcttgaatctagatatggtatccttg
atgataattgatgagtgccatcgtgctactggtaatcatccctacacaaaaataatgaag
gaattctatcacaagttgagtaacaagccaaagatttttggaatgacagcatcacctgtt
gttagaaaaggtgtctcttccactatggattgtgaggatcaaatatcagaacttgagagc
attttggattcgcaggtttatactatcgaagacaggacagaaatggacatccatgttccc
tctgcgagagaaacatgtagattttatgacaaagcacagtgttatagttcagaattgaaa
tccaagattgaagcatcatggtccaagtttgatgcttcaatgctaagtttgcaagggtca
atacaaagcggttacaaggacattgatgataaaattaggacactgagacagaggctgtcc
aatgaccatgcaaagattttgaattgccttgaagatctaggcctcatatgtgcttatgag
gctgtcaaagtttgcttgcagagtgctcccaactccactgaggattgtgtgatttataga
gaaatttctctacaacatagatatttccttgaggaagtgttgagcctaattggcgagtcc
ttgccacattgtgataattttcttttggatcttgattttgatttcttaaaggcagtagtt
ttcggctacatatctccaaaattatatgaactgcttcaacttttcctatcatttggagga
gctaggcaaatactgtgcctcatttttgttgatagaattgttacagctaaagtaattgaa
agatttgtgaagaaagttgcagtgttagcacatttcacagtttcatatgttactggaact
aatacatcagtagatgcagtgacccctaaaacgcagaaggaaacgctggaatcatttcgt
tctggaaaggtcaacttattattttccactgatgtgctgagggagggaattcatgtgcca
aactgctcctgtgtaatatgttttgatttgcccaagacagtctgctgttatgtccaatct
cgaggacgtgctagacaaaatgattccgaatatatcattatgcttgagaggggaaacgtg
aaacaaagggaccaactatttgatttcatcaggagtgaatggctaatgacaaatacaact
ataaatagagatcctgatgtacagtctctgaaaacatgtgctgctgaggaaactaaagca
tatattgtgaatgcgactggggcatcagttactgcagactccagtgttaatctcatatat
cgatattgtgaaaagcttcctggtgacaggtactttacaccaaggccaacttttgagttc
gaagtttttgaacagtcatgccagtgtaaaataaagttacctgccagtgcagcttttcaa
acactagttggcccaatatgtaggagtcaacaattagctaagcagcttgtatgcttggaa
gcttgtaagaagctgcatcaaatgggtgccctggatgatcatctccgaccgtcatttgat
gaccctatggaagataattgtattatgagaagcaaagaaacattagcaggtgcaggaact
acaaaaaggaaggaattgcacggaaccactggcattcatgcattatctggaagctgggga
gagaaccttgatggaaccaccttctatgcatataagtttgacttctcttgtagtattgcc
acagagatgtattccggatttattcttctaattgagtcgaagcttgatgatgatgttgga
aatgttgagttggacctttacttggtcaggaagattgttagggcttctgtttcttcatgt
ggacaagtgcatttagatgctgaacagatgatgaaagcaaaatgctttcatgaattattt
ttcaatgccttatttgggaagttgtttaccgggtccaaatcatctaaaacaagagagctt
ttgcttcagaaagaaaaaagtttgttttggatcccatcaaacatgtatttgctactacca
ctcgagactttcagtgcttcaaatgatgagtcttggaaaataaattggagtggagttgat
tcttgcacatatgtggtagaatttttgaagaactctttcttgggtgctgagcaatgtaat
ggtgaaagcagaaggtcatcatcttgtagggttggctcatctgttactgaatgcagtggt
gtaaacacaatccactttgctaatttttcagttgatgcagataaactgaaagatgtggtg
gtattggcaattcacacaggaaaaatatactctgttattgaagtggtgagtgatatgtct
gctgagagtccttttgagcaaaatgctggtgatgcaccatcaaattattcttcattcact
gagtacttcaacaaaaagtatggaattgtgctgatgcatccaggacaacctttgttgctg
ttaaagcaaagccataaaccacacaacctgcttccaaatcctaatgatgaagttacttca
aaagatggcatggctgttgtaaaacagcgacaatttgttcatatgccacctgagctttta
gtcagtattgatattccagtccagactctaaaatcattttacttacttccatctttgatg
tatcgtctggagtctctgatgttagccagtcaacttagacaggagattgactgccggatt
cctgactgttatatcccaagttcactgatgttggaagcaataacaacacttagatgtagt
gaaactttttccatggagcgattggagttgcttggagattcagttttgaagtatgctata
agttctgacctctttctaagataccctacaaaacatgaaggccaattatctgctcggcgc
atacaggctgtttgtaattcagccctacataaattgggaataagtctcaaattacaggga
tatatacgagacagtgcattcaatcctcgttgttgggttgctccagggcagcgacctgca
tattatattccttgtaaatgtggggttgatactttagaagtgcctttagatgccaaattt
caaactgaagaccctaaaattaagattgcaatatgctgctccatgggccaccgatggatc
tgttccaaaaccatatctgattgtgttgaagccattttaggagcatactacgtaagtgga
ggactgattgctgcagttcatgtgatgaagtggcttggtatggatattgaatatgatcct
tcattggtagatgaagccatttccagtgcttctttacgttcttatatgccaaaagaaaat
gaggtaacgagcctcgagtcaaagcttggttatacattttctgtcaagtttcttatacaa
gaggctatgacacatgcatccatgcaagagcagggagttggctattgttaccagagactt
gaatttcttggtgactctttattggacttgctcatcacatggcatctctatcaaagccac
acaaacattgatcctggtgagttgacagacttgcgctcagcttgtgttagtaatgaaaat
tttgctcaaattgttgtgagaagggagctatacaagcatcttcaacattgttctacatta
cttctaagccagataacagaatatctggagtctttttgtgaatctgatgaagccaccaaa
ttgtccacagttccaaagggtcccaaggctcttggagacctacttgaaagtatagcaggg
gcaatgttagttgatacaaagtttgaccttgatgaagtgtggagaatatttaagccactg
ttgtctccaattgcaacacctgagagtctggagctgcctccattgcgtgaactgattgaa
ttatgcgactctcatggatattttataaaagaaagatgtacaattaagaatgacattgtg
catgcgcatcttagactacagctgaatgatgttcttttggttggagacggatatgatcgg
aacagaaaaactgcaaaaggaaaagcggcttctcatttgttgaaggaacttgagaataga
ggaataaggtactcccgaggtgattcaaagaggaaacaagatcctgatcacgttgttgat
tcatcttccctagacctaacaaacgctcacacctgtgagccaaaaaaccataagaagcag
aagaaagtagaaaatgaatctcctacagggtcaagtggcgttccttcccttgttggcagt
cccaaagagggcctcccagttatcgagtcaattaacatgaagaaaggaggacctcgaacc
actcttttcgaactctgcaagaaaggggaatggacaaggcctacatttcaaacaacagaa
actaagtcgagaactcctataatatttggtgaaggcagtgaaagaagagaatcatttatc
agttttatatcaaaaataaccctgaacatacccttttatggcatcattgaatgcgcagga
gatcctagacctgataagaagagttcattcgattcagctgcacttgctatgctttatgag
cttaaagagctgggacgactcatcattgtcgatgcgcaatga
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integrated database retrieval system
