Hevea brasiliensis (rubber tree): 110655341
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Entry
110655341 CDS
T05150
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110655341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110655341
03036 Chromosome and associated proteins [BR:
hbr03036
]
110655341
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110655341
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110655341
PBAF complex
110655341
GBAF(ncBAF) complex
110655341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110655341
NCBI-ProteinID:
XP_021667316
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MPASPPFHSDGRGKWKRRKRDPQITRKQHPKHEHEDPDDEGEDDAVEDYNNNNHLDDDSE
DPNLPQSAALPDPNHLKTEVIADGEVRICDFPSVTKLAVNRPHESVFAIVALERANLIGA
NNGSCRGQVPNFENVSYGQLQAVSTVPAEGFGSDQERNDGGNSAYVVTPPPNMEGKGVVK
RFGTRVHVVPMHSDWFSPATVNRLERQVVPHFFCGKSPDHTPEKYMECRNYVVAKYMENP
GKRITVSDFQGLVVGTENEDLARIVRFLDHWGIINYCAGPPSRESWNGGSYLREDPNGEV
HVPSAALKSIDSLIKFDKPKCRLKAADVYSSLSCRDDDFSDLDNRIRERISENCCTYCSQ
HLPGIYFQSQKEIDVLLCSDCFHEGRFVTNHSSLDFIKMDPTKDYSDLDGESWSDQETLL
LLEAMEVYNENWNEIAEHVGTKSKSQCILHFLRLPMENGLLENIEVRSMSKSSNLSSRDN
HGMLRSQSNGSCLQDADAESRIPFANSGNPVMSLVAFLASAVGPRVAAACAHASLAALSE
DNRVNSEKLHGREGNFQGEVANSIQQKEDNVHGSRVPNEAEGVLLSAEKVKAAAKAGLAA
AATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMRECEQVEKTRQRFA
AERARILSTQIGPAGATSQMNLGGVSPSMVSNNVGSSRQQVMPTSSSQPSISGYGNNQQV
HPHIPFVQRGQPQPMFSLGPRLPLAAIQASSSVPSNAVFNASGNSQPSLNQMLRSVSGPS
SGLG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctcctcctttccattcagatggcagaggcaaatggaagagaagaaagcgg
gacccccaaatcactcgaaaacaacaccccaaacacgaacacgaagaccctgatgatgaa
ggcgaagacgacgccgttgaggactacaacaataacaaccacctcgacgacgattctgag
gaccccaacctcccccaatctgctgctcttcctgatcccaaccatctcaaaactgaggtc
atcgctgatggtgaggtccgcatatgtgacttcccttccgtaacgaagcttgcagtgaat
cggccgcatgagtcggttttcgctattgtggccttagagagggcgaatttgattggggcc
aataatggtagttgtagggggcaggtgcctaatttcgagaatgtttcgtacgggcaactg
caggctgtctctaccgtgcctgccgagggttttgggtctgatcaggagagaaatgatggt
ggaaattctgcttatgtggtgacgccgcctccgaatatggagggcaaaggtgttgtaaaa
cgatttgggactagagttcatgtggttccaatgcattcagattggttttcaccagccacg
gtgaatcgattggaaaggcaagtggtgccacattttttctgtggaaaatcaccagatcat
acaccagagaaatacatggaatgtaggaattatgttgttgctaaatacatggagaatcca
gggaagaggatcacagtttctgattttcagggattggttgtcggaactgagaatgaagat
ttagctcgaattgtcaggtttcttgatcactggggaattatcaattactgtgcaggccca
ccaagccgtgaatcctggaatggtgggtcctacttaagagaggatccaaatggtgaggtt
catgtgccatcagctgctttaaagtcaattgatagtttgatcaaatttgacaagcctaaa
tgtaggctcaaggcagctgacgtctattcatcattgtcatgtcgtgatgatgatttctct
gacttggacaacagaattcgagagcgtatttcagaaaattgttgcacttattgttctcag
catcttcctggcatatactttcagtcacagaaggagatcgatgtacttctatgctctgac
tgcttccatgaggggaggtttgtgaccaatcattcaagcttggattttataaagatggat
ccaacaaaggattatagtgatttagatggagaaagttggagtgatcaagaaacactattg
ctgcttgaggcaatggaggtttacaatgagaattggaatgaaattgcagaacatgttgga
acaaagtcaaaatcacaatgcattcttcattttcttcgtctacccatggagaatggcctg
ttggaaaatattgaagttcgaagtatgtccaagtcatctaatctatcaagtagagataat
cacggaatgctacgttcacaatccaatggatcctgcctccaagatgctgatgctgaaagc
agaatcccttttgcaaattctgggaatccagtgatgtccttggttgcctttctggcttct
gctgttggaccaagagttgcagcagcatgtgcccatgcgtccttggcagcattgtccgag
gataatagggtgaattctgagaaattacatggtagagaaggcaattttcagggagaagtt
gcaaattcaattcaacaaaaggaagacaacgtgcatggttcacgggttccaaatgaggcg
gagggtgttcttttatctgcagaaaaagtcaaagctgctgcgaaagctggtcttgctgct
gcagcaactaaggctaaactgtttgcagatcatgaagagagggaaattcaaaggctatct
gctaatatcattaatcatcagttgaagagattggagctgaagttgaagcagtttgcagaa
gtggaaacttttctaatgagagagtgtgaacaagtggagaagaccaggcaaaggtttgct
gctgagcgggcccgcattctatcaacgcagattggacctgctggggctacttcacaaatg
aacctgggaggcgtttctccttccatggttagcaacaatgttggcagcagtaggcaacaa
gtaatgcctacctcttcttcacagccaagtatttcaggatatggcaacaatcaacaggtc
catccccatattccatttgtgcaacggggacagccacagccaatgttttcattagggcca
aggctgcccctagcagctatacaggcatcctcatctgttccatcaaacgccgtgttcaat
gcctctggaaattcacagcccagtctcaatcaaatgctgaggtctgtgtcggggcctagc
tctggtttaggttga
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