Hevea brasiliensis (rubber tree): 110655499
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Entry
110655499 CDS
T05150
Name
(RefSeq) LOW QUALITY PROTEIN: protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110655499
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
110655499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_14
TPR_16
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_7
TPR_6
TPR_9
ANAPC3
TPR_10
ARM_TT21_C
RPN7
ARM_TT21_5th
NatA_aux_su
Fis1_TPR_C
YfbU
Motif
Other DBs
NCBI-GeneID:
110655499
NCBI-ProteinID:
XP_021667507
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR
QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEYFIQATKYYNKA
SRIDMHEPSTWVGKGQLLLAKGELEQASNAFKIVLEGDRDNVSALLGQACVEYNRGHYSD
SLVSYKRALQVYPNCPGAVRLGIGHCYYKMGNFKKASQAFERVLQLDPENVEALVALAIL
DLQTNEAAGIRRGVEKMQKAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGDIKN
ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKSLELLRKATKIDPRDAQAFLDLGELL
ISSDAGAALDAFKTAYSLLKKGGQEVPIEVLNNIGVIYFDREELKLALETFKEALGDGIW
RAFLDSQAKTYTVDAAASILQYKDMQLFHRLEEDGFVVELPWDKVTALFNLARLLEQMHN
TETASVLYRLILFKYPDYVDAYLRLAAIAKARNNLQLSIELVNDALKVNDKCPNALSMLG
DLELKNDEWVKAKETFRAASEATDGKDSYAILSLGNWNYFAAIRNEKRNPKLEATHLEKA
KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINL
AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQDCKKTLLRAIHLA
PSNYILRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSASSNLHFHGF
DEKKINTHVEYCKHLLDAAKVHREAAEREEQQNRQRQEVARQMALAEEARRKAEEQRKFQ
LERRKQEDEAKRVRQQEEHFERVKEQWKSSTPASKRRDRSEIDDDEGGHSEKRRRKGGKK
RRKDKSSKSHYEMEENEADMMDDHEELEDEDANINYREHRSKGNDYDENAEENAQELLAA
AGLEDSDAEDEAPAPSSTSRRRRAWSESDDDEALERKPQSSPVRENSAELQESDGEIRED
VDKQHGDAAMDDED
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtgtacattccggtgcagaactcggaggaggaggtgagggtggctctggat
cagctccctagggacgcctctgatatccttgatatcctcaaagccgagcaagctcctctt
gatctttggcttatcatcgcgagggagtactttaaacaagggaaacttgatcaattccgc
cagatattggaggaaggatccagtcatgaaattgatgaatattatgctgatgttagatac
gagaggattgccatcctaaatgctttaggggcttattatagctatcttgggaaaatcgag
acaaaacagagagaaaaggaggaatattttatacaggccaccaaatactacaataaagct
tcaaggattgacatgcacgaaccttctacatgggttgggaaaggtcagctgttactggcc
aagggtgagttagaacaggcatctaatgcatttaagatcgttctggagggagaccgtgat
aatgtatctgctcttttgggtcaggcatgcgtcgagtacaaccgtggtcattacagtgat
tctttggtatcgtacaagagggctttgcaagtgtatcctaattgtcctggagctgttagg
ctgggtataggtcactgctactataaaatgggcaattttaaaaaagcatcgcaagcattt
gaacgggttttgcagttagatccagaaaatgttgaagctcttgtagcccttgcaattttg
gatttgcaaacaaatgaagctgctggaataaggagaggggtggaaaaaatgcagaaggcg
tttgagatatacccctactgtgcaatggcactgaattatctagcaaatcactttttcttc
actggtcagcactttttagttgagcaactgactgaaactgcacttgccgtgaccaatcat
ggaccaacaaagtcacactcttactacaatttagcacgctcttaccatagcaagggggac
tatgaaacagcttcaaggtactactgggcatctgtgaaggaaatcaataagcccagtgaa
tttgtgtttccatattatggattggggcaagtacaactgaagttgggagatattaaaaat
gcactatcaaattttgaaaaggttttggaggtctaccctgataattgtgagacattgaaa
gttcttggtcatatttacgttcagcttgggcagactgagaaatctctagaacttttgagg
aaggctacaaaaattgatccacgtgatgctcaggcgtttctcgacctgggtgaattgtta
atttcatctgatgcaggagctgctcttgatgccttcaaaactgcatacagtcttctgaaa
aagggaggtcaagaagtgccaatagaagtgcttaataatattggagttatttattttgac
agagaggaacttaagcttgctctggaaactttcaaggaggctctaggtgatggaatatgg
cgtgctttccttgatagtcaagcaaagacgtatacagttgatgcagctgcatctattctc
caatacaaagacatgcaattatttcatcgattggaggaagatggctttgttgtagagcta
ccttgggataaagtcacagcattatttaatttggccagattacttgagcagatgcataac
acagaaactgcaagtgtgttataccgtctcatattgtttaagtatccagactatgtggat
gcttatttgaggctggctgccattgcaaaagctcgaaataatcttcaattaagcattgaa
ctggttaatgatgctctgaaggtgaatgacaagtgtccgaatgcgttatcaatgcttggt
gatttggagctgaaaaatgatgagtgggttaaggcgaaagaaacctttcgggctgccagt
gaagcaactgatgggaaggattcttatgctattctctctctgggaaactggaactacttt
gctgcaatacggaatgagaaaagaaatcctaagttggaggctacccatttggagaaagcc
aaggaactatacaccagagtcctagttcagcatacagctaatttgtatgctgccaatggt
gctggagtagtcttggcagaaaaaggacattttgatgtatcaaaagatctttttacacag
gtccaggaggctgcaagtggaagcatttttgtccagatgccagatgtgtggataaatttg
gcacatgtttattttgctcaaggcaattttgcattagctgtgaagatgtatcaaaattgt
ctgcgcaagttctattataatacagactctcaaattctcctctatttggcccgtacacat
tatgaagctgaacagtggcaggactgcaagaaaactttactaagagctatccacttggca
ccttcaaattacatactaaggtttgatgcaggagttgcaatgcaaaaattctcagcatct
acactacaaaagacgaagagaacagtagacgaggtgcgctcaacagttgatgagctggaa
aatgctgttcgtttattcagtcagttatctgcttcttccaaccttcactttcatgggttt
gatgagaagaaaatcaacacccatgttgagtattgtaagcatttactcgatgctgcaaaa
gttcatcgtgaagcagctgagcgtgaggagcagcagaaccggcagagacaggaagtggct
cgtcagatggcattggccgaggaagcccgtcgtaaagcagaagaacaaaggaaatttcag
ttagagaggaggaagcaggaagatgaagcaaaacgggtgcggcaacaagaggagcatttt
gagcgtgtaaaggagcaatggaagagtagtacacctgcttctaagaggagggataggtct
gaaatagatgatgatgagggtgggcatagtgagaagagaaggagaaaaggtggaaagaag
agaaggaaggataagagttcgaagtcacactatgaaatggaagaaaatgaagctgacatg
atggatgatcatgaagaactggaagatgaagatgccaatattaattacagggaacacaga
agcaaagggaatgattatgatgaaaatgcagaagaaaatgctcaggaacttcttgcagca
gctgggcttgaagattctgatgcggaggatgaagcacctgcgccttcatcaacaagtagg
aggaggcgggcatggtcagaatctgatgatgatgaggcattagagaggaaaccacagtcc
agtcctgtccgagaaaattctgctgagctgcaagagagcgatggagaaatcagagaggat
gttgacaagcaacatggtgatgctgctatggacgatgaagattga
DBGET
integrated database retrieval system
