Hevea brasiliensis (rubber tree): 110655589
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Entry
110655589 CDS
T05150
Name
(RefSeq) pre-mRNA-processing factor 19 homolog 1-like isoform X1
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03040
Spliceosome
hbr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110655589
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110655589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hbr03041
]
110655589
04121 Ubiquitin system [BR:
hbr04121
]
110655589
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110655589
Enzymes [BR:
hbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110655589
Spliceosome [BR:
hbr03041
]
Complex B
Other components
Prp19 complex
110655589
Complex C
Prp19-CDC5 complex
110655589
Ubiquitin system [BR:
hbr04121
]
Ubiquitin ligases (E3)
U-box type E3
110655589
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
110655589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_VPS8
U-box
zf-Nse
WD40_like
Beta-prop_DCAF4
Beta-prop_Nup120_160
PAS_11
B-prop_COPA_B_2nd
KNTC1_N
Beta-prop_ACSF4
PUMA_CC
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
110655589
NCBI-ProteinID:
XP_021667660
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MHCSISGEVPEEPVLSKKSGLLYEKRLIERHISDYGKCPITGEPLTMDDIVLVKTGKIVK
PRTVQTASIPGMLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVITRLKK
ERDEARSLLAQAERQMPILATAAATTNVSAISNGKRGAEDENLGPPGKRMCSGISATIIT
ELTDCNAALSQQRKKRQIPPTLAPVDALERYTQLSSHPLHKTSKPGIVSVDIHYSKDIIA
TGGVDSTAVLFDRRSGQILSTLSGHSKKVTSVKFVTDGDLFLTGSADKTVRVWQGSEDGN
YDCRHILKDHTAEVHAVTVHATKNYFVTASLDNTWCFYDLSSGICLSQDDWYDDLVLQVS
DNSKSDTSKPEGYTSAAFHPDGLILGTGTSEAVVKIWDVKSQANVARFDGHVGAVTAISF
SENGYFLATAAHDSVKLWDLRKLKNFRTLNLYDSDIPTNSVEFDHSGCYLGVAGSDIRVF
QVASVKAEWNCVKTLPDLSGTGRLTCAKFGPDAKYIAVGSMDRNLRIFGLPGDEGQAE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcactgctcaatctctggcgaggtgccggaagagcccgtcctctcgaagaaatctggg
cttctttatgaaaagcgtttaatcgagaggcacatatctgattatggaaaatgcccaatt
actggggaaccacttacaatggatgacattgttcttgtcaaaacaggcaagattgtgaag
ccgagaactgtacagactgctagcatcccagggatgcttggaattttccagaatgaatgg
gatgctctgatgctatccaattttgctttggagcaacaactacatactgcaaggcaagag
ctaagccatgcattataccagcatgatgctgcttgccgagtgattacaagacttaaaaag
gaaagggatgaagcaaggtcattgcttgcacaagctgaaaggcagatgcctattttagca
acagcagctgctacaaccaatgtctctgctattagcaatggaaaaagaggtgctgaggat
gaaaatttgggcccacctggaaagagaatgtgttctggaatttcggccaccatcattact
gagttaacagactgtaatgcagccctttcacaacagcggaaaaagcggcagattcctcca
acattggctcctgttgatgctttagagaggtacacacagctttccagtcatccccttcac
aaaaccagcaagcctggcattgtatctgtcgatatccattactccaaggacatcattgct
actggaggggttgattccactgcagtactttttgatcgccggtcaggacaaatcctatcg
acactaagtggtcactcaaaaaaggttactagtgtgaaatttgtcacagacggtgattta
tttttaactggatcagcagacaagacagttcgtgtatggcaaggatctgaagatggaaac
tatgactgcagacacatcttgaaggatcatactgctgaggtgcatgctgtcactgtacat
gccacaaaaaactactttgtgactgcttctctagataatacgtggtgcttctatgatctc
tcctctgggatatgcttgtcacaggatgattggtatgatgatctagttctgcaggtctct
gacaattcaaaatccgacacttctaaacctgagggctatacatctgcagcttttcatcct
gatggtctcatccttggaacaggaacctcagaagctgttgttaaaatttgggatgtaaaa
agccaggcaaatgttgcaagatttgatggacatgttggagcagtgactgctatatctttc
tcagaaaacggttactttctagcaactgcagcacatgatagtgttaaattatgggatttg
cgcaaattgaagaacttccggacacttaacctttatgattcagatataccaacaaactct
gtggaatttgaccacagtggctgttaccttggagttgcaggctcagatataagagttttc
caagttgccagtgtgaaagcagaatggaattgtgtcaaaactctccctgatttgtctggc
acaggaagattaacgtgtgcaaaatttggtcctgatgcgaaatacatagcagttggatca
atggatcgcaacctccgtatatttggcctgcctggggatgaaggtcaagcggagtaa
DBGET
integrated database retrieval system
