Hevea brasiliensis (rubber tree): 110655619
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Entry
110655619 CDS
T05150
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110655619
03041 Spliceosome [BR:
hbr03041
]
110655619
03036 Chromosome and associated proteins [BR:
hbr03036
]
110655619
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110655619
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110655619
mRNA cycle factors
Common to processing body (P body) and stress granule
110655619
Spliceosome [BR:
hbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110655619
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110655619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110655619
NCBI-ProteinID:
XP_021667702
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MAWTDMITESSRKPTRPTRPSYVPPPFRNTATTTSFGYPTESMHSGSFCGAVYGFVRSST
SRPGSSRRGGGRSRGRGRSGSQRWPSVNQNFNNQRLVDVSENFDELEITEDDGSNINTKE
NSAINFDAYEDIPVEVTGSHIPPPVNTFTEIDLGQGLNDNIQRCKYVKPTPVQKHAIPIA
VAGRDLMACAQTGSGKTAAFCFPIICGVLRNRFQTAGSGRGRSRMAYPSALILSPTRELS
CQIHEEAQKFAYNTGVKIVVAYGGAPIVQQFRNLEKGVDILVATPGRLVDMIERARVSLG
MIKYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGERQTMLFSATFPLEIQRLASDFLSD
YIFLTVGRVGSSTDLIAQRVEFVQDMDKRSHLMDLLRARKANGTHGKRPLTLIFVETKRG
ADALEHWLSMNGFPAIAIHGDKVQMERERALKSFKSGMTPILVATDVASRGLDIPHVSHV
INFDLPKDIDDYVHRIGRTGRAGKSGLATAFFSDKNIPLAKALVELMKEANQEVPLWLSQ
YAENISYGGGGRTKRYGAGRFGSYDFRGAYGGADSSADSYASSSAYVDAVSAGTGYTAAT
DDAGYSVPATAESHSVASHGYEFDHKSVIATGWD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcttggactgatatgatcactgagtcttcccggaaaccaactcgcccgacccgacca
tcctatgtccctccacccttcagaaacaccgctaccaccacttcatttggttatcccact
gagtcgatgcactctgggagtttttgtggggctgtgtatggcttcgtccgctcttcaacc
agtcgacccggttcgtctcgtcgtggtggtggtcgttcacgtggtcgtggccgtagcggt
tctcaacggtggccctctgtcaaccaaaattttaacaaccagcgcctagttgacgtaagt
gaaaattttgacgagctagagatcacagaagatgatggtagtaacattaacaccaaagaa
aatagtgctatcaactttgatgcgtatgaggatattccagtcgaagtcactggctcccac
atacctccaccggtgaataccttcactgaaattgatttgggacaaggtttgaatgataat
attcagaggtgcaagtatgtgaaaccaactccggttcagaagcacgccatacccattgcg
gttgctgggagggacttgatggcttgtgcacagactgggtcggggaaaactgctgccttc
tgttttcccattatttgtggggttttgaggaaccggtttcaaactgctgggtcgggtcgt
ggtaggtctagaatggcctatccctctgcactcattctatctcctaccagggagttgtct
tgtcagattcatgaggaggcgcagaagtttgcttataacactggagtgaagattgtggtg
gcatatgggggagcacccatagtacaacagtttcgcaatttggagaagggtgttgacatc
ttagttgcaactcctggtcgcttagttgatatgattgagagagcaagagtttctcttggg
atgataaagtatttggccctagatgaggctgatcgaatgttggatatgggattcgaacct
cagatacggaagattgtccagcaaatggacatgcctccaccaggtgaaaggcagaccatg
cttttcagtgccacttttccacttgagatacagagacttgcatctgattttctctcagac
tacatttttctcactgtggggagagttggttcaagcactgatttaattgcacaaagagtt
gaatttgttcaggatatggacaaaagaagccacctcatggatcttcttcgagcccgtaag
gcaaatggaacccatggcaagcggccattaactctgatttttgtggagacaaagagaggt
gcagatgccttagagcattggttgtccatgaatggttttccagcaatagcaatacatggt
gacaaagtgcaaatggagagagaacgagctctgaaatcctttaagagcggtatgactcca
attttggtggcaactgatgttgcatcacgaggcttggacattcctcacgtgtctcatgtc
atcaattttgatctgccaaaagacatagacgattatgtgcacaggataggccgaacaggg
cgtgctggtaaatctggactggcaactgcatttttcagtgacaagaacatcccacttgca
aaggcacttgttgaactaatgaaggaagcaaatcaggaggttcctttgtggcttagccag
tacgctgaaaatatatcttatggaggtggtggccgaaccaaacgatatggtgctggcagg
tttggcagctatgacttccgtggtgcctatggtggtgctgacagcagtgcggattcgtat
gcttcttccagtgcatatgtcgatgctgtttcagccggtacaggttatactgcagccaca
gatgatgctggttacagtgttcctgccactgctgaatctcattctgtggcatcacatgga
tatgaatttgatcacaaatcagttattgctactggatgggattag
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