Hevea brasiliensis (rubber tree): 110655898
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Entry
110655898 CDS
T05150
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110655898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hbr04131
]
110655898
Membrane trafficking [BR:
hbr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110655898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
110655898
NCBI-ProteinID:
XP_021668077
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MILGGIEDEDKWLAEGIAAIQHNAFYMHRALDANNLREALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRRLEIFFKDESRHGVSVVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDIGSDYEGDADTAMDAVEFVL
QNFIEMNKLWVRMQYQGPGRVREKQEKERSELRDLVGKNLHVLSQIEGVDLEMYRDTVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLDTLLDAYPQLQPTVDVKTVLSQLME
RLSNYAASSEDVLPEFLQVEAFAKLSSAIGKVTEAHVDMPIVGAITLYLSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGKPKLEDSRATKQIVALLSAPLEKYNDVVTALTLSNYPRVMD
RLDNETNKVMAMVIIQSIMKNYTCISSADKVEVLFELIKGLIKDLDGTTAEELDEEDFKE
EQNSVARLIHMLYNGEPEEMLKIFCTVKKHIMTGGPKRLPFTVPPLIFSALRLVRKLQCQ
DGDVVGEELPATPKKIFQLLNPTIEALSSVPSPELALRLYLQCAEAANDCDLEPIAYEFF
TQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDLDGIKDGERVLLCLKRALRIANAAQQMATVTRGSGGPVILFVEILN
KYLYFFEKANPQITSSAIQSLIELINTEMQSDSTTPDPAASAFFASTIRYIQFQKQKGGV
MGEKYDPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgattttaggcggaatagaggacgaagacaaatggcttgccgaaggaattgccgccatt
caacacaacgccttctacatgcatcgcgctttggatgctaacaatcttagagaagctctc
aaatactctgctcagatgctgtcggagctccgaacttcgaaactctcccctcacaaatac
tacgaactatatatgagagctttcgatgaattgagaaggctggaaatattctttaaggac
gagagcagacatggcgtttcggtcgttgatttatatgagctcgtgcagcatgctggaaat
atattacctagactgtatctgctgtgtacggtaggatcagtgtatatcaaatcgaaagag
gctccagccaaggatgtgcttaaggatcttgtggaaatgtgtcgcggggttcagcatcca
attcgtggactatttctcagaagttaccttgctcaagttagtagagataaattgccagat
attggttctgattatgaaggagatgctgacacagccatggatgctgtagaatttgtgcta
caaaatttcattgagatgaataaactttgggttcggatgcagtatcagggacctggtcgg
gtaagagagaagcaggaaaaggaaagaagcgagctccgtgatcttgtagggaaaaatctc
catgttcttagtcagatagaaggtgtggaccttgaaatgtacagagacactgttcttcct
agagttttagagcaggttgtcaactgtaaagatgagcttgcacagtattatttgatggat
tgcataattcaggtctttccagatgagtaccacttgcagactcttgacacattattggat
gcttatcctcagcttcagccaacagttgatgtcaagacagtgctatcacaattgatggag
agattatcaaattatgctgcttcaagtgaagatgttttgcctgagttcttgcaagtagaa
gcttttgctaaattgagcagtgccattggaaaggtgacagaagcacatgttgacatgcca
attgttggagccattactttgtatttatccctccttacatttacactccgtgtacatcct
gatcggttggattatgtggatcaagtgctgggggcatgtgtgaagaagctttctggaaag
ccaaagcttgaagacagtagagcaacaaaacaaattgttgcacttctgagtgctccatta
gagaaatacaatgatgtcgtcactgccttgacactttcaaattatcctcgtgttatggac
cgtcttgataatgagactaacaaagttatggccatggttattatccaaagcattatgaaa
aattatacttgcatttctagtgctgataaggttgaggtgttgtttgaattgataaaaggc
ctcattaaggatttggatggaactactgcagaggagcttgatgaggaggatttcaaggaa
gaacaaaattctgttgctcgccttatacacatgctttataatggtgagccagaggaaatg
ttgaagattttctgtactgtgaagaagcatataatgactggaggaccaaaacgcttacct
tttacagttcctcctctcatattttctgcacttaggctggtcaggaagttgcaatgtcag
gatggagatgtagtaggagaagaactgcctgctacacctaagaaaatttttcaactcttg
aatccgaccattgaggctctgtcatctgttccatcacctgagcttgcattaaggctgtat
ttgcaatgtgctgaggctgcaaatgactgtgatcttgagccaattgcttatgaatttttc
actcaggcatttgtcctatatgaagaagaaattgcagattccaaggcccaggtgactgca
atacatctaattattggtactctccagaggatgaatgtatttggtgtagagaacagggat
accttaacacacaaggccactggatattctgcaaagcttttgaagaaacctgatcaatgc
agagcagtttatgcatgttcacatctattttgggttgatgatctggatggcatcaaggat
ggagaaagggtcctactttgtcttaagcgtgccttgaggattgcaaacgccgcacagcaa
atggccactgttacaagaggcagcggtggaccagttatactctttgttgaaatattgaac
aagtatctgtacttctttgaaaaagcaaacccacagattactagttctgccatccagagc
ttgatagaattaattaatactgaaatgcaaagtgattctactacccctgatccagcagca
agtgctttctttgccagcacaattaggtacattcagttccagaaacaaaaaggtggtgtt
atgggtgagaaatatgaccctatcaaggtgtga
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