Hevea brasiliensis (rubber tree): 110657534
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Entry
110657534 CDS
T05150
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110657534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110657534
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110657534
mRNA degradation factors
5'-3' decay
Decapping complex
110657534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
110657534
NCBI-ProteinID:
XP_021670468
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MASPNQQTPQFDMHKFFMPTTTATSQNSSPNLIIPPPTSIPSSSYPPPTGTHSNFPFQFP
QQFHHAPSYAPPHDNHTHNHHHPPSSPISNMPPQRSLSYPTPPLQPQPQPQPQQQQQQNP
SPRNNNDRSGAEIMALLRPPPLLNQDPTPPPPQQHQLQHQHTPEFSNIIPPLGPIRMPSS
KMPKGRRISGDHVVYDVDVRLQGEVQPQLEVTPITKYTSDPQLCLGRQIAVNKSYICYGL
KQGNIRILNINTALRSLFRTQSQRVTDMAFFTEDVHLLASVGIDGRINVWKISEGPDEED
KPQITGKTVIAVQIVGEGDIKNPRVCWHCYKQEILVVGVGKRVLRIDTNKVGKTGVYSSE
VPLQCPVEKLIDGIQLVGKHDGEVTDLSMCQWMTTRLVSASMDGTIKIWEDLKLVPLVVL
RPHDGLPVYSATFLTATNRPDHIILITAGARNQELKIWVSAKEEGWLLPSDADSLNCNQT
LELKSSAEPRTEEAFFNQVVALSQVGLLLLANAKRNAIYAVHLDYGPNPAASRMDYISEF
TVTMPILSLTGTSDVLHGQCVAQVYCVQTQAIQQYTLDLCQCLPPLLENVGSEKSDPNVS
HDLANVEGVAPLDSRGSNFSDIPTSSASVDAATLHHISSSNSPSTPPVLTPSASDTEITC
VTSSPLFLTRKVLTEVTVAGRLEPGPPPGDQSLNQPVIDYSVDQKMDTIHANVSNVTSLD
SDSRTDEMKGTQDGNSGILNPPIVFKHPPHLITPSEILMGASSPSNNNDEVKTEVETNIQ
EVVVINNVSNAEVEVKVVGETNSTQKDEFGHRGEPKNPISENKEKYFCSQASDLGIEMAR
ECCSISAETYTMEEPQQVDFNDAAEFLAQLSHTSEEEVHDSTKDTSRKVSESSMPAIVQQ
STTPNMKGKKQKGKNSQATGPSSSSPSAFNSTDSSNEPNGTSSLPSIEVAFPQIFAMQEM
LNQISTLSLETNLGREMGGLKAEELVTTQKEMQKQMSNVVAVPVSKECRRLEAAVGRSIE
KAVKANTDALWARFQEENAKNEKLLRDRTQQIASMISNFVNKDLTTMLEKAVKKELASVG
PAIARSMSPVIEKTISSAIAESFQRGVGDKAVNQLEKSVNSKLEATVARQIQAQFQISGK
QALQDALKAGLEASVVPAFEMSCKAMFEQVDSTFRKGLVEHTTTAQQHFESAHSSLALAL
REAINSASSLTQTLSGELAESQRKLVALVAAGANSNAANPLVTQLSNGPLAGLREKVETH
LDPTKDLSRLISEHKYDEAFTIALQRSDVSIVSWLCSQVDLCGILAMVPLPLSQGVLLSL
LQQLACDVSKDTARKLVWMTDVAAAINPADHMIAMHVRPIFDQVSQILHHQRSSPTITGV
ELSTIRVLLHVINSVLVTYK
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcatccccaaatcaacaaaccccacagtttgatatgcacaaattcttcatgcccaca
accacagcaaccagccaaaactcttctcccaatctcatcattcctcctcctacatcaatc
ccttcttcttcttatcctcctcctactggtacccactccaacttccccttccaattccca
cagcaattccaccatgccccctcgtatgctcctccccatgacaaccatacccataaccac
catcaccctccttcttctcctatctctaatatgccaccgcagcgctctttgtcgtatcct
acgcctcctcttcaaccccaacctcaacctcagcctcaacagcaacagcagcaaaaccct
tctcctcgcaacaataatgatcgtagtggggctgaaatcatggccctcctccgccctcct
ccactgcttaatcaagacccaacaccgccaccgcctcagcagcatcagcttcagcatcag
cataccccggaattcagcaacattattccacctctgggacccattaggatgccgagcagc
aagatgcccaagggcaggcgaatttcgggtgatcatgtggtgtatgatgtggatgtgagg
ttgcaaggggaggttcagcctcagcttgaggttacccccatcactaaatacacttcggat
cctcagctgtgcttgggaaggcaaattgctgtcaataaatcttacatttgttatgggttg
aagcagggaaatattaggattcttaacatcaataccgcattgaggtccttgtttcgcacc
caatctcagagggtcactgacatggctttcttcactgaggatgttcatctcttagctagt
gttggcatagatggacggataaatgtctggaaaatttctgaaggtccagatgaggaagat
aagccacaaattactggaaagactgttattgctgttcaaatagtaggagagggggacatt
aaaaatccacgagtttgttggcattgctataaacaagaaattttggtagttggggttggt
aaacgtgttcttagaattgatactaacaaagttggaaagactggagtctattcatcagag
gttcctcttcagtgtcctgttgaaaaactgattgatggtatccagttggttggtaaacat
gatggagaagttactgatttatcaatgtgccagtggatgactacccgtttggtttctgct
tctatggatggcacgattaagatttgggaggatctcaagttggttcctcttgtggtattg
agaccgcatgatggcctgcctgtttactcggctaccttcttgactgcgaccaaccgacca
gatcacatcatccttatcacagcgggggcccggaatcaggaattgaaaatctgggtctca
gccaaagaagaaggatggcttttacctagtgatgctgattcattgaattgcaaccagacc
ttagaactgaagagttcagctgaacctcgaactgaagaggcattcttcaatcaagttgta
gctctgtcccaagtgggtctcctcttacttgcaaatgcgaagaggaatgccatatatgct
gtacacttggattatggtcctaatccagcggcatctcgcatggattacatatcagagttt
actgttaccatgcctatcttgagtttaacagggactagtgatgttttacatggccaatgt
gttgctcaggtttattgcgtccagacacaggctattcagcagtatactttggacttgtgc
cagtgcttgccgccactgttggagaatgtgggttcagagaagtcagatcccaatgtttca
catgatctagctaatgttgaaggagttgctcctttggactcacgtggaagcaacttttct
gacatccctacaagctctgcttctgttgatgcagccactttgcatcatatttcctcttct
aatagtccctctacgcctccagttttgaccccttcagctagtgacactgagatcacatgt
gttacatcatctcctcttttcttgacgcgcaaggttttaacagaggttacggttgcagga
aggcttgagccaggtcctccacctggtgaccaaagtttaaatcagccagtcattgattat
tcagttgaccagaaaatggacactattcatgcaaatgtatcaaatgttacttccttggat
agtgactcaaggactgatgagatgaaaggcacacaagatggaaattctggcatccttaat
ccgcctatcgtgtttaaacacccaccgcatctgataactccttccgagattctaatgggt
gcttcatctcctagtaataataatgatgaggtcaagactgaggttgaaacaaatattcaa
gaagttgttgtcattaataatgtcagtaatgcagaggtggaggttaaagtagttggtgaa
acaaactctactcagaaagatgaatttggtcaccgtggagaacctaaaaaccccatttca
gaaaacaaggaaaaatatttttgttcccaggcttcagatcttggtattgagatggccagg
gagtgttgttccatatcagcagaaacttatacaatggaggaacctcagcaagttgatttt
aatgatgcggctgagtttcttgcccaattgtctcatacaagcgaggaagaagtccatgac
tccacaaaagatacatcacggaaagtttctgagtcaagtatgcctgcaatagttcaacaa
tcaacaactccaaatatgaaggggaagaagcagaaggggaaaaattctcaagcaacaggt
ccatcttcttcttctcctagtgcttttaattcaacagattcgtccaatgagccaaatggc
acttcaagtctcccatctattgaagttgcctttcctcaaatttttgctatgcaggagatg
cttaatcagatttctaccctgagtttggaaacaaatttaggaagggaaatgggaggactg
aaagctgaagagctagtgaccacacaaaaagaaatgcagaagcaaatgtcaaatgtggtt
gctgtccctgtttcaaaagaatgtagaagactagaagcagctgtaggacggagcattgag
aaagctgtgaaggcaaatactgatgcattatgggctcgttttcaagaagagaatgcaaaa
aatgagaagttattgcgagatcgcacacagcaaatagcaagtatgatctctaactttgtc
aataaggatttgacaacaatgttagagaaagcagtgaagaaagaattggcttcagttggg
ccagctatagctcgttcaatgtctccagtcattgagaaaacaatatcttcagctattgca
gagtcgttccagagaggagtaggtgataaggcagtgaatcagctggagaaatcagttaat
tcaaaacttgaagcaactgttgctaggcaaattcaagcacagttccaaatttctggaaaa
caagctctccaggatgccttgaaggctggtttggaagcttctgtggtccctgcctttgag
atgtcgtgcaaagctatgtttgagcaagtagactcaaccttccgtaaagggttggttgaa
catacgactacagctcaacagcattttgaatctgcacattcttcattggccctggcttta
agagaagccatcaactctgcttcatcattgactcaaacattaagcggggaattggctgaa
agtcaaaggaagctggtagctcttgttgctgctggtgcaaactcgaatgcagcaaatccc
ttggttacacaactgagcaatggacctttggctggcctccgtgaaaaggttgagacgcat
ttggatccaacaaaagacctatcaagattgatatccgaacacaaatacgatgaggccttc
accattgccctgcaaagaagtgatgtgtcgattgtatcttggttatgttctcaggttgat
ttgtgtgggatcttagcaatggttcctctcccattaagccaaggagtattgctctctctc
ctacagcagttggcctgtgatgttagcaaggatacagctcgaaagctggtgtggatgaca
gatgtggcagccgccataaacccagcagaccatatgattgcaatgcacgtgcggcctatc
tttgatcaagtatctcagatcctacaccatcaacggagctcacctacgatcactggtgtt
gagctctcaaccatccgtgttctcttgcatgtcatcaactccgtgctggtgacctataaa
tga
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integrated database retrieval system
