Hevea brasiliensis (rubber tree): 110657894
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Entry
110657894 CDS
T05150
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110657894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110657894
03036 Chromosome and associated proteins [BR:
hbr03036
]
110657894
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110657894
Coactivators
SAGA/TFTC/STAGA complex
110657894
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110657894
STAGA complex
110657894
TFTC complex
110657894
SAGA complex
110657894
SLIK complex
110657894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
110657894
NCBI-ProteinID:
XP_021671024
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MSIVPKETIEVIAQSIGINNLSEDAALSLAPDVEYRMREVMQEAIKCMRHSKRTILTSDD
VDAALNLRNVEPIYGFASGGPLQFKRAIGHRDLFYIDDKDVDFKDVIEAPLPKAPLDTSV
VCHWLAIEGVQPAIPENAPLEVIAPPSDGKNSEQKDKLPVDIKLPVKHVLSRELQLYFDK
ITELTLRRSDSALFKEALVSLATDSGLHPLVPYFTCFIADEVACGLNDYKLLFALMRVVW
SLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTASLVASICKRFGHIY
GSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVQVRLLVLPNLEPYLRVLEPEM
LLEKQRNEMKRYEAWRVYGALLRAAGQCIYDRLKIFPPLPSPPAHAVWRANRKIVTCSNK
RKAGTEHLEQLPPKRIATDGPVDVVSTDLSPSHMPGEAVAPAPSNDSNVGPSTSSAHMPN
SNDLDRKVERGKGDHRSMKTSAILNQVWKDDLKSGHLVASLFELFGQGILSFIPAPEMSL
FL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagtgccaaaggagaccatagaagtgatagcgcaaagcattggcataaacaat
ttgagtgaagatgcagccctttctctcgctcctgatgtcgaatatcgcatgcgtgaggtc
atgcaagaagctatcaaatgtatgcgccattccaagaggactatcttgacctctgatgat
gttgatgctgctctcaacctcagaaatgtcgagccaatatatggctttgcatcaggtggt
cctttgcagttcaaaagagccattggtcatagggatctgttttacattgacgacaaggat
gtggattttaaagatgtgattgaagctccattaccaaaagcaccacttgatacttcagtt
gtttgtcactggctagctattgaaggtgtccaacctgctatacctgaaaatgctccattg
gaagttattgcacctccttctgatggcaaaaacagtgaacaaaaggataaacttcctgtt
gatattaaattgccagttaagcatgtactatctagggagcttcagttatactttgataaa
atcacagagcttacgttgagaaggtctgattcagccctctttaaagaagcgttggtgagt
ttagccactgactcgggacttcatccgttggttccttatttcacgtgcttcatagctgat
gaggttgcttgtggtttaaatgattataaacttctctttgctttgatgcgtgttgtttgg
agtcttcttcagaatcctcacattcatattgaaccttatctacatcaattgatgccatct
gtagtcacctgcctcgttgcaaaaaggttagggaatagatttgcggacaaccactgggaa
ctcagagacttcactgctagcctggttgcctcgatatgcaaaagatttgggcatatttat
ggcagtctccagacacgtttgacaaaaactttgctcaatgcacttttggacccaaaacgg
tcactgactcagcactatggtgcaattcaagggttggcagccctaggacctaacgtgcag
gttcgccttcttgtactgccaaacctcgagccttatctccgagttctagaaccagagatg
cttcttgagaagcaaaggaatgagatgaagaggtatgaagcttggcgtgtttatggagca
ttgctgcgtgcagcaggacagtgcatatatgaccgtctcaagattttcccacctttgcca
tcacctccagcacatgctgtgtggagggccaatagaaaaattgttacatgttcaaataaa
cgcaaggcaggcacagagcacttggaacagctgccaccaaagaggatagcaactgatggt
ccagttgatgtggtgtcaacagacttatcaccatcacatatgccaggcgaagcagtcgct
ccagctccttcaaatgattctaatgtggggccatccacatcttctgcacatatgccaaac
agtaatgacttggaccgcaaagttgaaagggggaagggagatcatcgatctatgaagaca
tcggccatcctcaatcaggtgtggaaggatgatttgaaatctgggcatctagtggcatca
ctgtttgaactatttggtcaaggcattctctcgttcattccagcccctgagatgtcatta
ttcttatga
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