Hevea brasiliensis (rubber tree): 110658316
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Entry
110658316 CDS
T05150
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110658316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110658316
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110658316
mRNA degradation factors
5'-3' decay
Decapping complex
110658316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EML_2
LTV
Motif
Other DBs
NCBI-GeneID:
110658316
NCBI-ProteinID:
XP_021671562
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MASPNQQTPQFDMHKFFMPTTTGSVQNPSPSLMIPPTTSIPSSYPSPTGTHPNFPFQFPQ
QFLHIPSYPPPHNNQTHTHTQLHPPPVSNMPPQRSMSYPTPPLQPQPQQHQNLSPRKNNE
RRGAEIMALLRPPASPPLNQDPSPTPPQEHQHSPEFSNNVPPVGPVRMPSSKMPKGRRIS
GDHVAYDVDVRSQGEVQPQLEVTPITKYTSDPQLCLGRQIAVNKSYICYGLKQGNIRILN
INTALRSLFRTQSQRVTDMTFFAEDVHLLASAGIDGRINVWKISEGPDEEDKPQITGKTV
IAVQIVGEGENKNPRVCWHCYKQEILVVGVGKRVLRIDTNKVGKTGVYSSEVPLQCPVEK
LIDGIQLVGKHDGEVTDLSMCQWMTTRLVSASMDGTIKIWEDLKAVPLVVLRPHDGQSVY
SATFLTATNRPDHIILITAGPQNREVKIWVSAKEEGWLLPSDADSLNCTQTLELKSSAEP
RVEAAFFNQVVALSQVGLLLVANAKRNAIYALHLDYGPNPAATHVDYISEFTVTMPILSL
TGTSDVLHGQCVAQIYCVQTQAIQQYSLDLCQCLPPLLSDVGSEKSDSNVSHDLANVEGV
DPLDSRGSDFSDIPACSASVDAATLHDISSSNIDSKPLVLPPSISDGEIACVASSPLSLT
HKDFAGVTVAARLEPGPPLGDQIVNQPVIDYLVDQQMDSINANLSDVPSLDSDSRTDEMK
GTQDENSSILNPPIMFKHPTHLITPSEILMGASSPSGNNNNNNNELKAEFEANIQDVVDN
NVSNAEVEVKVVGETKSTQNDEFGLRGEPKHLISENREKYFCSQASDLGIEMARECCSIS
AENYTMEEPQQVDGVDMAEFLAQPSHTSKEEVHDDSTKDTLGKASELSMPTIVQRSTTPN
TKGKKQKGKNSQPSGPSLSSSAFNSTDSSNEPTGTSSLLSLEAAFPQIFAMLEILNQLVT
TQKEMQKQMSNMVAVPVSKECRRLEAALGRSIEKAVKANTDALWARFQEENAKSEKLLRD
RMQQITSLISNFVNKDLAVMLEKAVKKELSSAGPAVARSMSPVIEKTISSAIAESFQRGV
GDKAVNQLEKSVNSKLEATVARQIQAQFQISGKQALQDALKAGLEASVVPAFEMSCKAMF
EQVDSTFRKGMVEHTTAAQQHFESAHSSLALALREAINSASSLTQTLSGELAESQRQLVA
LVAAGTNSSAANPLVTQLSNGPLSGLLEEVETHLDPTKDLSRLISEHKYDEAFTIALQRS
DVSIVSWLCSQVDLRGILAMVPLPLSQGVLLSLLQQLACDVSKDTARKLTWMTDVAAAIN
PADQMIAMHVRPIFEQVTQILHHQRSSPTTTGAELSTIRVLMHVINSMLVTYK
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcatccccaaatcaacaaaccccacagtttgacatgcacaaattcttcatgcccaca
accacaggaagcgtccaaaacccttctccctctctcatgattcctcctactacgtcaatc
ccttcttcctatccttctcctactggtacccaccctaacttccccttccaattcccacag
caattcctccatatcccttcgtatccacctccccataacaaccaaacccatacccatacc
cagctccaccctcctcctgtctctaacatgccaccacagcgttctatgtcatatcctaca
ccgcctcttcaacctcagccccaacagcaccaaaatctttctcctcgcaaaaataatgag
cgacgtggggctgaaataatggcccttctccgcccacctgcttctccgccacttaatcaa
gacccgtcaccaacaccgcctcaggagcatcagcatagcccggaattcagcaacaatgtt
ccacctgtgggacccgttaggatgccgagcagcaagatgcccaagggcaggcggatttcg
ggtgatcatgtggcatatgatgtagatgtgaggtcgcaaggggaggttcagcctcagctt
gaggttaccccaatcactaaatacacttcggatcctcagctgtgcttgggaaggcaaatt
gctgtcaataagtcttacatttgttacgggttgaagcagggcaatattaggattcttaac
atcaatactgctttgaggtccttgtttcgcacccagtcccagagagtcaccgatatgact
ttctttgctgaggatgttcatctcttggctagtgctggcatagatggacggattaatgtc
tggaaaatttctgaaggtccagatgaagaagataagcctcaaattacaggaaagacagtt
attgctgttcaaatagtaggagagggggaaaataaaaatccacgagtttgttggcactgc
tataaacaagaaattttggttgttggggttggtaaacgagttcttagaattgatactaac
aaagttggaaagactggagtctattcgtctgaggttcctcttcagtgtcctgttgagaaa
ctgattgatggcatccagttggttggcaaacatgatggagaagttactgatttatcaatg
tgtcagtggatgaccacccgtttggtttctgcttctatggatggcacgattaagatttgg
gaagatctcaaggctgtgcctcttgtggtgttgagaccacatgatggtcagtctgtgtac
tcagctaccttcttgactgccacaaaccggccagatcacatcatccttatcacagcgggg
ccccagaatcgggaagtaaaaatttgggtctcagccaaagaagaaggatggctattacct
agtgatgctgattcattaaattgcacccagacactagagctgaagagttcagctgaacct
cgagtcgaagcggcattcttcaatcaagttgtagctctatcccaagtgggtcttctctta
gttgcaaatgcaaagaggaatgccatatatgctttgcacttggattatggtcctaatcca
gcagcaacccatgtggattacatatcagagtttactgttaccatgcctatcttgagttta
acagggactagtgatgttttacatggccaatgtgtggctcagatttattgtgttcagacg
caggctattcagcagtacagtttggacttatgccagtgcttacccccacttttatcggat
gtgggttcagagaagtcagattccaatgtttcacatgatctggctaatgttgaaggagtt
gatcctttggattcacgtggaagtgacttttctgacatccctgcatgttctgcttcagtg
gatgcagccactttgcatgatatttcctcttccaatattgactctaagcctcttgtttta
cccccttcaattagtgatggtgagattgcttgtgtcgcatcatctcctctttccttgaca
cataaggatttcgctggggttacagttgcagcaagacttgagccaggccctccacttggt
gaccaaattgtaaatcagccagtcattgattatttagttgaccaacaaatggacagtatt
aatgcaaacttatcagatgttccttccttagatagtgactcaaggactgatgagatgaaa
ggcacacaagatgaaaattctagcatccttaatccccctatcatgtttaaacacccaaca
catctgataactccttccgagattttaatgggtgcttcatcacctagtggtaataataat
aataataataatgagctcaaggctgagtttgaagctaacattcaagatgttgtcgataac
aatgtcagtaatgcagaggtggaggttaaagtagttggtgaaacaaaatctactcagaat
gatgaatttggcctccgaggagaacctaaacaccttatttctgaaaacagggagaaatat
ttttgctcccaggcttcagatcttggtattgagatggccagggagtgttgttccatatca
gcagaaaattatacaatggaggaacctcagcaagttgacggtgttgatatggctgagttt
cttgctcaaccttctcacacaagtaaggaagaagtccatgatgactccacaaaagataca
ttagggaaagcgtctgagttgagcatgcccacaatagttcaacgatcaacaactccaaat
acgaaggggaagaagcagaagggaaaaaattctcaaccatcaggcccatctctttcttca
agtgcttttaattcaacagattcttccaatgaaccaactggcacttcaagtctcctgtct
ttggaagctgcctttcctcaaattttcgctatgctggagattcttaatcagctagtgact
acacaaaaagaaatgcagaagcagatgtcaaatatggtagctgtccctgtttcaaaagaa
tgcagaagactggaagcagctttagggcggagcattgagaaagctgtcaaggcaaatact
gatgcactgtgggctcgatttcaagaagagaatgcaaaaagtgagaagttattgagagat
cgcatgcagcaaataacaagtttgatctctaactttgtcaacaaggacttggcagtcatg
ttagagaaggcagtgaagaaagaattgtcttcagctgggcctgctgtagctcgttcaatg
tctccagtaattgagaaaacaatatcttcagctattgcagagtcattccagagaggagtc
ggtgataaggcagtgaatcaactggagaaatcagttaattcaaaactagaagcaactgtt
gctaggcaaattcaagcacaattccaaatttctggaaaacaagctctccaggatgccttg
aaggctggtttggaagcttcagtagtccctgcctttgagatgtcatgcaaagctatgttt
gagcaagtggattccaccttccgtaaagggatggttgaacatacaactgcagctcaacag
cattttgaatctgcacattcttcgttggctcttgctttaagagaagccatcaactctgct
tcatcattgactcaaacactgagtggggaattggctgaaagtcaaaggcagctggtagct
cttgtggctgctggcacaaactcaagtgctgcaaatcccctggttacacaactgagcaat
ggacctttatctggcctccttgaagaggttgagacgcatttggatccaacaaaagaccta
tcaagattgatatctgaacacaagtatgatgaggctttcaccattgccctgcaaagaagt
gatgtttcgattgtttcttggttatgttctcaggttgatttgcgtgggatcttagcaatg
gttcctctccccttaagccaaggagtattgctctctcttctacagcagttggcctgtgat
gttagcaaggatacagcccgaaagctcacatggatgacggatgtggcagcagccataaac
cccgcagaccaaatgattgcaatgcacgtgcggcccatctttgagcaagtaactcagatt
ctacaccatcagcggagctcacctacaaccactggtgctgagctctcaaccatacgtgtt
ctcatgcatgtcattaactccatgctggtgacctataaatga
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