Hevea brasiliensis (rubber tree): 110658450
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Entry
110658450 CDS
T05150
Name
(RefSeq) pectate lyase-like isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr00040
Pentose and glucuronate interconversions
hbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110658450
Enzymes [BR:
hbr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110658450
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110658450
NCBI-ProteinID:
XP_021671760
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MSTRTLSVLFLFFSSLLTPQFVFPSPASDPELVVREVNRSINASRRNLAFLSCGTGNPID
DCWRCDPNWERNRQRLADCAIGFGKDAIGGRNGRFYVVTDSGDEDAVNPKPGTLRHAVIQ
DEPLWIIFNRDMVIQLKQQLVMNSFKTIDGRGASVHISGGPCIIIHYVTNIIIHGLHVHD
CKQGGNGQIRDSPDHYSSWSKSDGDGISILASKHIWVDHCSLSNCHDGLIDVTRGSKAIT
LSNNYFTHHDKVMLLGHSDSFTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSASPTIYSQGNRFLAPDDSSKKEVTKHEHAPESEWRNWNWRSEGDLMENGA
FFRQTGAEASSSYARASSLSARPSSLVDSITRTAGALNCRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaaggactctttcagtccttttcctcttcttctcctcacttctaaccccacaa
ttcgtgttcccttccccagcttcggatcctgagctagtggtacgagaagtaaacaggagc
atcaatgcctccaggaggaaccttgccttcctatcatgtggaaccggcaaccccatcgac
gattgctggcggtgcgaccccaactgggagaggaaccgccagaggttagctgactgtgct
attgggtttgggaaggacgctattggaggacgaaatggaagattttacgtggtcactgac
tcaggtgatgaggatgctgtgaacccaaagcctggtactctcaggcatgcagtgattcaa
gatgaacccttatggattattttcaatagagatatggtgattcagctgaaacaacaactt
gtgatgaattccttcaagactattgatggtagaggtgctagtgttcacatttctggagga
ccatgcattatcattcactatgtaactaatatcatcatccatggattacacgtacatgac
tgtaagcaaggagggaatggtcaaatcagagattctcctgaccactattcgtcgtggagt
aaatccgacggtgatgggatttccatcctcgctagcaagcatatttgggttgatcattgc
tcgctctctaattgccatgatggtctcattgatgtcacccgtggatctaaagcgatcact
ctctctaacaactacttcactcatcatgacaaggtcatgcttttgggccatagcgactcg
tttacacaagacaaggacatgcaagttactattgcctttaatcattttggagaagggctg
gtgcagagaatgccgaggtgtaggcatggatattttcatgtggtgaacaatgactatacc
cactgggaaatgtatgccattggaggcagtgcttcccctaccatctacagccaagggaat
agatttcttgcgcctgatgacagctctaagaaagaggtgaccaaacacgagcatgcacca
gagagcgagtggaggaactggaactggaggtcggagggagacttaatggagaacggtgcc
ttcttccggcaaacaggagcagaagcttcttcaagctatgctagagcttctagcctgagt
gcaagaccatcttctcttgtggattcaataaccagaactgctggtgcacttaactgcagg
aagggttctcgttgctag
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