KEGG   Hevea brasiliensis (rubber tree): 110658756
Entry
110658756         CDS       T05150                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03018  RNA degradation
hbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110658756
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110658756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbr03019]
    110658756
   03041 Spliceosome [BR:hbr03041]
    110658756
Messenger RNA biogenesis [BR:hbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110658756
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110658756
Spliceosome [BR:hbr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110658756
 Complex C
  U2 snRNP components
    110658756
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C DUF1256
Other DBs
NCBI-GeneID: 110658756
NCBI-ProteinID: XP_021672182
LinkDB
Position
Unknown
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIDLLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgctgttcttttcgtatttcaaggacttggttggtagggaagtgacagtggagctgaag
aacgatttggcaatcagaggaacgcttcactctgtcgatcagtacctcaatatcaagctc
gagaacactagggttgtcgatcaagacaagtaccctcacatgctttctgtcaggaactgt
tttataaggggatctgtggttagatatgttcagttgcctccagaaggtgttgacattgat
ttgctccatgatgcaacaagaagagaagctcggggtggctga

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