KEGG   Hevea brasiliensis (rubber tree): 110658874
Entry
110658874         CDS       T05150                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03082  ATP-dependent chromatin remodeling
hbr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110658874
   03083 Polycomb repressive complex
    110658874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hbr03036]
    110658874
Enzymes [BR:hbr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110658874
Chromosome and associated proteins [BR:hbr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110658874
   HDAC complexes
    Sin3A-HDAC complex
     110658874
    BRAF-HDAC complex
     110658874
    REST complex
     110658874
    SHIP complex
     110658874
    MiDAC complex
     110658874
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110658874
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110658874
  Chromatin remodeling factors
   NuRD complex
    110658874
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110658874
NCBI-ProteinID: XP_021672330
LinkDB
Position
Unknown
AA seq 469 aa
MGDTTGGASLLSTGTDAKKRRVTYFYEPTIGNYYYGQGHAMKPHRIRMAHNLIVHYSLHR
RMEINRPFPAAPADILKFHSDDYVKFLSSVSPESMADPSHNRHLKRFNVGEDCPVFYELF
EFCQASAGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH
RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGTGQGKNYALNIP
LNDGMNDESFRSLFRPIIQKVMEIYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLHF
LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHFEP
SNMENLNSPKDMERIRNILLEQLSKLPNAPSVPFQTTPSTTEVPEEAEEDIDRRPKCCIW
NGEDYVSDPDEDEKFQPRSSNNDGQIVAEVEMRDYSDEKEDKREEHPRS
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgggtgacacaactggtggtgcttctctcctgtccaccggcaccgacgccaagaagcgt
cgtgtaacctacttctacgagcccacgattggcaactactactatggccagggacacgca
atgaagccccaccgaattcgcatggcgcataatttgatcgtgcactactccctccaccgt
aggatggagataaaccggcccttccccgcggctcccgctgacatcctcaagttccattcg
gatgactacgtgaagttcctttcttccgtgtctccagagtctatggctgacccctcgcat
aatagacatctcaagaggtttaacgttggggaggattgccctgttttctatgagcttttt
gagttttgtcaggcatctgccggtggctcgattggggctgctgtcaagctcaatcggggt
gatgccgatatcgcgttgaactgggctggtggcttgcatcatgctaagaagagtgaggcg
tccggattttgttatgttaatgatattgtgctggggattcttgagttgcttaaggttcac
aggcgtgtcctgtatgttgatattgatgtccaccatggagatggtgttgaggaggcattt
tatactactgacagggtcatgacagtgtcctttcataaatttggagatttctttccagga
acagggcatataaaggacactggtactgggcaagggaagaactatgctctgaatatccca
ttaaatgatgggatgaatgatgaaagtttccgcagtctgtttcgtcccatcatccagaaa
gtcatggagatatatcagcctgatgcggttgttctccaatgtggagcagattcattatct
ggtgataggttggggtgcttcaacttgtctgtgaagggtcatgctgattgccttcatttt
cttagatcttttaatgtccctttgatggtcttgggtggtggcggatatactattcggaat
gttgcccgttgctggtgctatgagacagcagttgcagttggggtggaacctgataataaa
ttgccttacaatgaatattatgagtactttggcccagattacacacttcactttgaacct
tccaacatggagaacttaaactcacctaaagacatggagagaataaggaacatactttta
gagcaactctctaaactgcctaatgctcccagtgttccttttcagacaacaccatccact
actgaagtcccagaagaggctgaagaggacattgatagaagacctaaatgttgcatatgg
aatggtgaagattatgtgtctgatcctgatgaggatgagaagtttcaacctagaagttcg
aacaatgatggtcagattgttgctgaagttgaaatgagggattattcagatgaaaaggaa
gacaagagagaagagcatccgcgttcttga

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