Hevea brasiliensis (rubber tree): 110659586
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Entry
110659586 CDS
T05150
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110659586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110659586
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110659586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
ARMET_C
AtuA
Motif
Other DBs
NCBI-GeneID:
110659586
NCBI-ProteinID:
XP_021673242
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MGLPNVSGDLSAEMEVDAFRRLFPLRFYERHLSESIRPDARPLGRARDTTLALGAVASAD
GSALAKIGSTTMLAAIKMEVMSPSTDSPDEGCIAIDFHMPPICSPIVRPGRPVEAAPVVS
KQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIP
IVSLNDDGKIVVVSEEGEGGKLDKEPVNKEKRKLTLRSLPFSLTCILHKNYILADPTAEE
ESIMETLVTVVLDSSSRLVSFYKPGGPVLAYTSAVQDCVALTRQRVKELKKILDEAVSGM
EID
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggattgccaaatgtctctggggacttatcagcagagatggaggttgatgcttttaga
cgccttttccctcttcgcttttacgagcgtcatctttcagagtctattcgccctgatgcc
agaccacttggaagagctagagatacaacactggctcttggggctgttgcatctgctgat
gggtcagcactggcaaagattggttcaactaccatgttggctgcaataaagatggaagtc
atgagcccttccaccgattcaccagacgagggctgcatagctattgatttccacatgcct
ccaatttgttctccaattgttaggcctggtaggcctgtcgaggctgcaccagttgtgtcc
aagcagttatctgacacaatactgagttctggcatgattaatttaaaggaactatctttg
gtcagtggaaaagcggcgtggatggcataccttgacatatactgtttggatgctgatggt
gctctttttgatgctgcattgctttcagcagtggctgccttctcccatttgcaaatcccc
atagtttccctgaatgatgatggaaagatagtagttgtgtctgaggaaggtgagggagga
aagttggataaggagccagtcaataaggagaagaggaagctcacgctgagaagcctgcca
ttctcattaacatgcattcttcacaagaactacatcttggcagatcctactgcagaggaa
gagtctatcatggaaactcttgtaacagtggttttggattcatcttctagacttgtgtcc
ttttacaagccaggtggaccagttcttgcctatacatcagctgttcaggattgtgttgca
ttaacaaggcaaagagtgaaggaacttaaaaagattttagatgaggccgtttctggtatg
gagattgattag
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