KEGG   Hevea brasiliensis (rubber tree): 110659586
Entry
110659586         CDS       T05150                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110659586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbr03019]
    110659586
Messenger RNA biogenesis [BR:hbr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110659586
SSDB
Motif
Pfam: RNase_PH RNase_PH_C ARMET_C AtuA
Other DBs
NCBI-GeneID: 110659586
NCBI-ProteinID: XP_021673242
LinkDB
Position
Unknown
AA seq 303 aa
MGLPNVSGDLSAEMEVDAFRRLFPLRFYERHLSESIRPDARPLGRARDTTLALGAVASAD
GSALAKIGSTTMLAAIKMEVMSPSTDSPDEGCIAIDFHMPPICSPIVRPGRPVEAAPVVS
KQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIP
IVSLNDDGKIVVVSEEGEGGKLDKEPVNKEKRKLTLRSLPFSLTCILHKNYILADPTAEE
ESIMETLVTVVLDSSSRLVSFYKPGGPVLAYTSAVQDCVALTRQRVKELKKILDEAVSGM
EID
NT seq 912 nt   +upstreamnt  +downstreamnt
atgggattgccaaatgtctctggggacttatcagcagagatggaggttgatgcttttaga
cgccttttccctcttcgcttttacgagcgtcatctttcagagtctattcgccctgatgcc
agaccacttggaagagctagagatacaacactggctcttggggctgttgcatctgctgat
gggtcagcactggcaaagattggttcaactaccatgttggctgcaataaagatggaagtc
atgagcccttccaccgattcaccagacgagggctgcatagctattgatttccacatgcct
ccaatttgttctccaattgttaggcctggtaggcctgtcgaggctgcaccagttgtgtcc
aagcagttatctgacacaatactgagttctggcatgattaatttaaaggaactatctttg
gtcagtggaaaagcggcgtggatggcataccttgacatatactgtttggatgctgatggt
gctctttttgatgctgcattgctttcagcagtggctgccttctcccatttgcaaatcccc
atagtttccctgaatgatgatggaaagatagtagttgtgtctgaggaaggtgagggagga
aagttggataaggagccagtcaataaggagaagaggaagctcacgctgagaagcctgcca
ttctcattaacatgcattcttcacaagaactacatcttggcagatcctactgcagaggaa
gagtctatcatggaaactcttgtaacagtggttttggattcatcttctagacttgtgtcc
ttttacaagccaggtggaccagttcttgcctatacatcagctgttcaggattgtgttgca
ttaacaaggcaaagagtgaaggaacttaaaaagattttagatgaggccgtttctggtatg
gagattgattag

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