Hevea brasiliensis (rubber tree): 110660053
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Entry
110660053 CDS
T05150
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110660053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110660053
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110660053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_10
TPR_MalT
TPR_8
SRP_TPR_like
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
110660053
NCBI-ProteinID:
XP_021673896
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MLDIGVHKFSLSDFLDLAMDSRDSTSSQSTPTANRETVAAAAASSSNTSEDDAVLSVTAA
LAKDAALHFQSRRFVECLAVLHQLKLKKENDPKVIHNIAIAEYFHDGCSDTRKLLEVLNN
LKKKSEQLAWASGEQVDAGSDAGNKVISGSKGSGTTAHQFSVTNSATLIYMDEFDPAVAT
LNIAIIWFHLHEYTKALSVLEPLYHNIEPIDETTALHVCLLLLDVALACQDASKSADVLI
YLEKGFGFGCGSQGDNASTTQQQSANLVTKLSSIPTSSSALEASNLDLAPSGNSLENSLS
KTLSLSEESLEYETMFSLDISGQNLTRPSGLPSSNDLSRTQVDRSMSTIDLKLKLQLYKV
QFLLLTRNLKQAKREVKLAMNIARGRDSSTALLLKSQLEYARGNHRKAIKLLMASSNRTE
MGISSMFNNLGCIYYQLGKYHASSLLFSKALTCSSSLRKDKPMKLLTFSQDKSLLIMYNC
GIQHLACGKPLLAARCFQKASLIFYNLPILWLRLAECCLMALEKGLIKAGRTPSHKSEII
VHVIGKGKWRHLAIENGSSRNGYLDSVEREDLFLGSDGQPKLSVTLARQCLLNALHLLDS
SDIKHLKSSLPSSISLEENESSEAESLKNSNHKSLTGLDAKASSLCMGLGQLNANGDTKE
QKGVTGQEIMQNSVSFFEDIRRRENQMIKQALLANLAYVELELENPEKALSIAKSLLEIP
ECSRIYVFLGHVYAAEALCLLNKPKEAAEHLSIYLSGGINVELPFSQEDCEEWRVEKTYD
CEDTNGGSTSAKISSPEESQGFVFLKPEEAQGILYANFATMHAAQGELERAHHFVTQALS
LIPDSPEATLTAVYVDLMLSKSQAAISKLKKCSRVKFVPSHVHLNKS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgctagatattggtgttcataaattctcactctctgatttcttggatctggccatggac
tcgcgagattcaacttcttcccaatccacgcccaccgcaaatcgagaaactgttgctgca
gctgctgcgtcatcgtccaacacttctgaagacgacgccgttctgtctgtcactgctgct
cttgccaaggatgcggccttgcatttccagtctcgccgtttcgtggagtgcctcgccgtt
ttgcatcagctcaagttaaagaaagaaaacgatcccaaagtgattcataatattgctatt
gcggaatactttcatgatggttgttcagatacaaggaagttgcttgaagtacttaataac
ttgaagaagaaaagcgaacagcttgcttgggcttctggagaacaggttgatgctgggagc
gatgctggaaataaagttatttcagggtctaaaggaagtggtacaacagcacatcaattt
tctgttacaaatagtgcgactctgatttacatggatgaatttgacccggcagttgcaaca
ttaaatattgcaattatctggtttcatcttcacgaatatactaaggcattgtcagttcta
gaacctttgtatcacaatattgaacctattgatgagacaactgctctccatgtttgcctt
ctgttgctggatgttgcacttgcctgccaggatgcatcaaaatctgctgatgtactgatt
tatctagaaaaaggttttggttttggctgtgggagtcaaggtgataatgcaagcacaaca
cagcaacaatctgcaaatctagttacaaaattatcctctattccaaccagttcatcagcc
ttggaagcttctaatttggatttagcacctagtgggaattccttggaaaattctttgtcg
aaaactttatcactatcagaggagtcacttgagtatgaaaccatgttttcattagacata
agtggacagaacctgacaaggccatctggtctcccatcttcaaatgatctttccaggacc
caagttgataggtctatgtctaccattgatctgaagcttaagttgcagctttacaaggtc
cagtttctacttctcacaaggaatttaaaacaagcgaagcgcgaagtcaagcttgctatg
aacattgcacgtgggagagactcatccacggctctcctcttgaagtctcagcttgaatat
gctcgtgggaatcatcgtaaagccatcaagttgttgatggcatcaagtaatcggacagag
atggggatttcaagcatgttcaacaaccttggttgcatttattatcagcttgggaaatac
catgcatcatctctcctcttttccaaggcactaacttgtagttcatctcttcggaaggac
aagcctatgaaactgttaactttttcacaagataaatctctccttattatgtacaattgt
ggtatacaacacttggcttgtgggaaacccttgttggctgctcgctgtttccagaaagca
agtttaattttttacaaccttcctatcttgtggctccggcttgctgagtgttgtctgatg
gctttagaaaagggactcataaaagctggtcgaactccatcacacaaatcagaaattata
gttcatgttattggcaagggaaaatggaggcatcttgcaatagaaaatgggagttcaaga
aatggatatttggattctgttgaaagggaggacttgtttttgggcagtgatggccaaccc
aagctctcagtgacccttgcccggcaatgtctcctcaatgctctgcatttgttggactct
tctgatatcaaacatttgaagtccagtttgccttctagtatctccttggaagaaaatgaa
tccagtgaagcagaatctctcaagaattcaaaccacaagagtttaactggcttagatgcc
aaagcatcatctttatgtatgggcttaggtcagcttaatgcaaatggggatacaaaagag
cagaagggagtgacaggtcaggagatcatgcagaattccgtctctttctttgaagatatt
cgtaggagagagaatcagatgattaagcaagctcttcttgctaacttggcttatgtggag
ttggaactagaaaatcctgagaaggccttgtccattgcaaagtccctcttggaaattcca
gaatgctcaagaatttatgtttttcttggtcatgtatatgcagctgaggccctctgcttg
ctaaacaagcctaaggaagctgctgagcacttgtcaatttatttgtctggaggaattaat
gttgagttgcccttcagccaggaggactgtgaggaatggcgagtggagaaaacttacgat
tgtgaagataccaatggaggatcaaccagtgccaagatttcttcccctgaggaatcacaa
ggttttgtgttcctcaaaccagaagaggcgcaaggtatcctttatgccaattttgcaacc
atgcatgcagcacaaggtgagcttgagcgggcacaccattttgtgacccaagcattgtct
cttatacctgacagtcctgaggccactttgaccgcagtttatgtggatcttatgctcagt
aagtcacaagcagctatttccaagttaaaaaaatgtagtcgggtcaagttcgttccaagc
catgtacacttgaataaatcttga
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