Hevea brasiliensis (rubber tree): 110660409
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Entry
110660409 CDS
T05150
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04120
Ubiquitin mediated proteolysis
hbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110660409
04120 Ubiquitin mediated proteolysis
110660409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hbr04121
]
110660409
Enzymes [BR:
hbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110660409
Ubiquitin system [BR:
hbr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110660409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
FlxA
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-RING_16
zf-C3HC4_4
zf-HC5HC2H
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110660409
NCBI-ProteinID:
XP_021674417
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MVLRFDFFFLNFDSKHGMIDLWFIFHADLVKMMRLRTYASLSLVATIAVIYHAFNSRGQF
YPAMVYLSTSKINLVLLLNMGLVIMCILWQLTKRVFLGSLREAEVERLNEQSWREVMEIL
FAITIFRQDFSVMFLAMVTALLLIKALHWLAQKRVEYIETTPSVPMLSHIRIVSFLGFLL
LLDSLFLYSSIKYLIETRQASVSLFFSFEYMILATTTVSTFVKYIFYVSDMLLEGQWEKK
AVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFRLRVADYIRYRKI
TSNMNDRFPDATPEELNASDATCIICREEMTTAKKLNCGHLFHVHCLRSWLERQHTCPTC
RALVVPPENGASTAGGQHGSRSDTHRQGTGTTSTGLQGSVGSMPDDNLSQHQTRLQAAAA
AAAVYEKSFVYPSANTLVWSPGYTLLPQAQRPLAYAANGESSREQAFIGQSQQESAFHAG
PSNLSLPQFSHCIFVPFQVPGANANYGDRLGSVPNSELEAQKKLLEHQIEVLQRQLQLLQ
QPKAEGSMHMDPTTSSESEGKTVASSSLTDSGHHGESNM
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggtgctaagattcgattttttttttttaaactttgattccaagcatggaatgatcgat
ctctggtttatttttcatgcagacttggtgaaaatgatgcggctgcgtacatatgctagc
cttagtttggtggcaactatagcagttatttatcatgcattcaacagtagaggccagttt
tatccagctatggtttatttgtcgacctctaagatcaatttggtgcttcttcttaacatg
ggtctagtcattatgtgcattttatggcaattaactaaacgggtattccttggttccctc
cgagaagctgaagttgaaaggttgaatgagcagtcatggagagaggttatggaaattctc
tttgctatcactattttcaggcaggacttctcagtgatgtttcttgctatggtcacagct
ttactgttaatcaaggcattacattggttagcccaaaagagggtagagtacatcgagaca
accccatcagtgcccatgttgtctcacattcggatagtttcatttctcgggttccttctt
cttctagacagtctgtttttgtacagttctattaagtatttgatagaaacacgccaggct
tcagtttctctcttcttctcctttgagtatatgatactagcaacgacaacagtctctact
tttgtaaagtatattttctatgtgagtgacatgctattagaaggacaatgggaaaaaaag
gctgtctacaccttctacttggaacttattcgagatttgcttcacttatctatgtatctc
tgcttcttccttgtgattttcatgaactatggtgtacctttacacttaataagggagctc
tatgagacattcaggaatttcagacttcgtgttgctgattacattcgttaccggaagatc
acttcaaatatgaatgatcggtttccagatgcaacacctgaagagctcaatgcaagtgat
gcaacctgcattatttgtcgtgaagagatgacaacagccaaaaaattaaactgtggacat
ctctttcatgttcattgtctccgttcatggttggagaggcagcatacttgtcctacatgc
agggccctcgttgtaccacctgagaatggtgcaagtacagctggagggcaacatgggtcg
cgatcagatactcatcggcaggggaccggcaccacaagtacaggactgcagggctcagtt
ggcagtatgccagatgataatttgagccagcatcagaccaggctccaagctgctgctgct
gctgccgctgtatatgagaaatcttttgtttatccttctgcaaacactctagtttggtct
cctggatataccttgcttcctcaagctcaaaggcctttggcttatgctgctaatggagag
tctagtagagaacaggccttcataggacaatcacagcaagagtctgcattccatgctggg
ccttcaaacttgtccctaccacaattttcacactgtatctttgtaccctttcaggtacct
ggtgccaatgcaaattatggagataggttgggcagtgtaccaaactctgagttggaagct
cagaaaaagcttctcgaacaccagattgaggtcctgcaaaggcaactccaacttctacaa
cagccaaaggctgagggtagcatgcatatggatccgacaacatcatcagaaagcgaaggc
aagacagttgcatcttcatccctaacagactctggtcatcatggagagagtaatatgtag
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integrated database retrieval system
