Hevea brasiliensis (rubber tree): 110660498
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Entry
110660498 CDS
T05150
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110660498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hbr03041
]
110660498
03009 Ribosome biogenesis [BR:
hbr03009
]
110660498
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110660498
Spliceosome [BR:
hbr03041
]
Complex A
U1 snRNP components
U1 related factors
110660498
Complex B
110660498
Ribosome biogenesis [BR:
hbr03009
]
Eukaryotic type
Pre-60S particles
Helicases
110660498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110660498
NCBI-ProteinID:
XP_021674561
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MVNPYDHRYSDPDSYRHRRSDLIGPPPPVGPPMVRGPYGRGGPVPYGGPSPPAFAGRGGP
GPVGGYPPFEPPVGRFDIGRGGGTVSGGRGFSGSRLPSGHIGDRRPDAARFGSGRGRDGG
RGGGRGGGRGVGGGRGFDGGRGGGRGVRRAGGATKGDLDNITLPKQDFGNLVPFEKNFYI
ESPSVQSMSENEAMMYRARRDITVEGHDVPKPIRMFREANFPDYCLEVIAKLGFVEPTPI
QAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLVQGEGPIVLVLAPTRELA
VQIQEEAIKFGSHANIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLR
RVTYLVLDEADRMLDMGFEPQIRKILSQIRPDRQTLYWSATWPREVETLARQFLRNPYKV
IIGSADLKANQSINQVVEVLTEVEKYNRLIKLLKEVMDGSRILIFMETKKGCDQVTRQLR
MDGWPALSIHGDKNQAERDWVLSEFKSGRSPIMTATDVAARGLDVKDIKCVINYDFPSSL
EDYVHRIGRTGRAGARGTAFTFFTHANAKFARDLIKILQEARQIVSPALSALARSGGALG
GSGGNFRSRGGRGGFGNRALISGSNTVPLGVKRPW
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacccttatgaccacaggtattccgatcccgattcttaccgtcaccgtcgcagt
gacctgattggcccgcctcctccggtcgggccgccgatggtgaggggaccttatgggcgc
ggtggaccggtgccttatggtggtccttcaccaccggcttttgcgggaagaggtggtccc
ggaccagtaggcggttatccaccatttgagcctccagttggtagattcgatattggccga
ggcggtggcactgtcagtggggggaggggcttcagtggtagccgtcttcccagtggtcat
attggggatagaaggcctgatgcagctcgttttggcagtggaaggggccgtgatggtgga
cgaggcggcggacgtggtggtgggcgtggtgttggtggaggaaggggatttgatggaggc
cgtggtggtggaagaggagttaggcgtgctgggggagctactaaaggagacttggataat
attactcttccgaagcaggattttgggaatttggtgccttttgagaagaatttctacatt
gagagtccttcagtacagtctatgtctgaaaatgaagctatgatgtatcgggcaaggagg
gatattactgtcgaaggtcacgatgtacctaagcccattcggatgtttcgagaggctaat
tttcctgattattgcttagaggtgattgccaagttaggttttgttgagccaacaccaata
caggcacaagggtggccaatggcccttaagggtagagatttaattggcattgcagaaacg
ggttctggtaagactttggcatacttgctgccagcattggtgcatgtcagtgcacaacct
cgattggtacaaggtgagggaccaattgtgttagtattagctcctacaagagaattagct
gttcaaatccaagaagaagctataaagtttggttcacatgctaatattaggagtacttgc
atatatggtggtgctcccaaaggacctcaaattcgtgatcttcaaagaggtgttgagatt
gtgattgctactcctggacgactaatagatatgttagaagctcaacatacaaacctgcga
agagtcacctaccttgtgttggatgaggctgatcggatgttggacatgggatttgagcct
cagattcggaaaattttatctcaaatccggccagatagacagactttgtattggagtgcc
acgtggccaagggaggttgaaactttagcaagacagtttctgcgcaatccatacaaggta
atcattggctcagccgatttgaaagcaaatcaatcaataaaccaagttgttgaagttttg
acagaggtggagaagtacaacagactgatcaaacttctaaaagaagtgatggatgggagt
cgaattctaatattcatggagaccaaaaaaggctgtgaccaagttacgaggcagttgaga
atggatggatggccagccctatccatccatggtgataaaaatcaagctgaaagggattgg
gtcctatctgagttcaaaagtggcagaagtcctataatgactgccactgatgttgctgca
cggggtcttgatgtgaaggacataaagtgtgtgatcaactatgattttccttccagcctt
gaggattatgtccacaggattggtcgaactggtcgtgcaggggctaggggaactgcattt
acctttttcacccatgcaaatgcaaagtttgctcgggatcttatcaagattttacaggaa
gcaaggcagattgtctctccagcattgtctgctttggctcggtcaggtggcgctctagga
ggttctgggggtaacttccgttctagaggaggacgaggaggctttggcaatcgtgcatta
atttcaggatctaatactgtgcctcttggtgtaaagaggccttggtag
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