Hevea brasiliensis (rubber tree): 110660662
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Entry
110660662 CDS
T05150
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110660662
03036 Chromosome and associated proteins [BR:
hbr03036
]
110660662
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110660662
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110660662
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110660662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
Mov-10_helical
PhoH
AAA_22
ATPase_2
Helicase_RecD
DEAD
AAA_16
UvrD_C
SLFN-g3_helicase
AAA
Motif
Other DBs
NCBI-GeneID:
110660662
NCBI-ProteinID:
XP_021674726
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MMGSVDGKWDDDEYSVIGDKGEVGFIDYQEDKSVCSYNPNEEGPIVISVPFPFEDRKPRS
VFIGETVTDSITIKNTTTEAVDLWTKIYASNPENSFALSLMEPPSANGGNGSRGFLETYA
LEDRMLQPGDTLTVWLNCKPKEIGLYTSIVHFDVGTDMIERVVFLLAEDNISRSLASRKP
YSRATRKKQFTVDNFVGGSRPLRPMGKAIKKRLPRYDIPKETREMIESKQNIDLIIGSLT
RQNYAYYFKMLLMMEEIQMEEDMRSYDMEGVGMRKKGNFLSLMVPGLAERRPSLVHGDYI
FAKIANADETTSPYQGFIHRVEADEVYLKFAAAFHSHHLNGNLYDVHFTYNRLNMRRQYQ
AVDAAENLETELLFPSESSGNRLIETTTLVPITCSLNEEQLCSIELILGCKGAPPYVIYG
PPGTGKTITIVEAILQLYKNRKDARILVCAPSNSAADHLLEKLLCKNAVNIRDNEIFRLN
ATSRSFEDVKPDHIRFCFFDDRLFKCPPLSALTRYRIIISTYMSACLLYTEGIERGHFSH
IFLDEAGQASEPETMIPISTLCHRDTVVVLAGDPMQLGPVIYSRDAEAYGLGKSYLERLF
ECESYCNGDENYVTKLVRNYRCHPNILNLPSDMFYGGELIASKESTDDTTSLLSLVNLLP
GRNFPVLFFGIQGCDEREGNNPSWFNRIEASKVVELINKLTAMGNLNEADIGVITPYRQQ
VLKLKKALDDLDMPNIQVGTVEQFQGQERKVIIVSTVRSTVRHNEFDRLHCLGFLSNPRR
FNVAITRAIALLIIIGNPHIISKDPYWNKLLWYCADHDSYQGCGLPERQDLVDECQIQED
CVSYDNSEENPLPSEEVGWGQESFQSEIPKPVTDEAEWSDGWK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcagtgttgatggtaaatgggacgatgatgagtattctgttattggagataaa
ggtgaagttgggttcatagactaccaagaagataaatctgtgtgcagttataatccgaat
gaagagggtcccatcgtcatttctgtccctttcccctttgaagatcggaaacctcggtca
gtgtttattggagaaactgttacggattcaatcactattaagaacactaccaccgaagct
gtggatttatggaccaaaatttatgcctccaatcctgagaattcttttgcactttctttg
atggagcctccatcagcaaatggtgggaatggcagccgtggttttttggagacttatgcc
ctggaggacagaatgcttcaacctggtgatactttaaccgtttggctaaattgcaaaccc
aaggaaattggcttgtacacttcaattgtgcattttgatgtgggaactgatatgattgag
cgagtggtttttctattggctgaagataacatatccaggtctttggcttcgagaaagcca
tattcaagagctacaagaaagaaacaattcactgtggacaattttgttggtggttcacga
cctctcaggccaatgggcaaggcaataaagaaaaggcttcctcgttatgatattcctaag
gagactagagaaatgattgagagcaagcagaacattgatcttattattggaagtctaacc
agacagaattatgcttattactttaaaatgttgttgatgatggaagaaatacaaatggag
gaagacatgagaagttatgacatggagggtgttgggatgaggaagaaggggaacttcttg
tcccttatggtcccggggcttgctgagcggagaccttcacttgtccatggagattacatc
tttgccaagattgctaatgctgatgaaacaacctctccgtatcagggctttattcatcgt
gttgaggctgatgaagtttatttgaagtttgccgctgcatttcacagtcaccatttaaat
gggaatctgtatgatgtacacttcacatataatcgactcaacatgagaagacagtatcag
gctgtagatgctgctgaaaatttagagacagagctcctctttccatctgagagctctgga
aataggcttattgaaactactactctggtgcccataacttgtagtcttaatgaagagcaa
ttgtgttctatagagttgatccttggctgtaaaggagctccaccttatgtcatttatgga
cctcctggtacaggtaaaactattacaatagtggaagcaatccttcagctctataaaaac
cgaaaggatgcccggattcttgtgtgtgcaccatcaaatagtgcagcagatcacttgctg
gagaagcttctttgtaagaatgctgttaatattcgagacaatgaaatattcaggctcaat
gcaacttcccgttcatttgaagatgtcaagcctgatcatattcgcttttgttttttcgat
gatcgtctcttcaagtgtcccccactcagtgctctcactcgctataggatcatcatatca
acatatatgagcgcctgtcttctttatacagagggtattgagcgaggtcacttctctcat
attttccttgatgaggctggccaagcttctgagccagaaaccatgatccctatatccacc
ctctgccatagggacacagttgttgttcttgctggagaccccatgcagttgggtcctgta
atatactcgagagatgctgaggcttatggcctgggaaaatcatacttggagaggctcttt
gaatgtgaatcttactgcaatggggatgaaaattatgtaacaaaactggttaggaactac
cgatgtcacccaaacattttaaatctcccatcagatatgttctatggaggggaattaatt
gcaagcaaagagtctacagacgatacaacttccttattgtctttggtaaatcttcttcca
ggcaggaactttcctgttctcttctttggtatacaaggctgtgatgagagggaaggcaat
aatccatcatggtttaaccgaattgaagcaagcaaggtggtagagctcataaacaaacta
actgctatgggaaatctgaatgaggctgatattggggttattacaccttacaggcagcaa
gtactcaaactaaagaaggccttggacgatttggatatgccaaacatccaagttggcaca
gtggaacaatttcaaggacaagaaaggaaagttatcattgtatcaactgttagatcaaca
gtcagacacaatgagtttgacagactccattgtttgggttttcttagcaatccaagaagg
tttaatgtggctattacccgagctatagcgttacttatcattattggcaatccacacatt
atcagtaaggacccatactggaataagcttttatggtattgtgcagaccatgactcctat
cagggttgtggtctcccagaaagacaggatctcgttgatgagtgtcaaatacaggaggat
tgtgtgagctatgacaacagtgaagaaaaccctctgccctctgaagaggttggatggggt
caagagtcctttcaatcagaaattccaaaacctgttacagatgaagctgagtggtctgat
ggttggaagtag
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