Hevea brasiliensis (rubber tree): 110660784
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Entry
110660784 CDS
T05150
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03030
DNA replication
hbr03420
Nucleotide excision repair
hbr03430
Mismatch repair
hbr03440
Homologous recombination
hbr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110660784
03420 Nucleotide excision repair
110660784
03430 Mismatch repair
110660784
03440 Homologous recombination
110660784
03460 Fanconi anemia pathway
110660784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hbr03000
]
110660784
03032 DNA replication proteins [BR:
hbr03032
]
110660784
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110660784
Transcription factors [BR:
hbr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110660784
DNA replication proteins [BR:
hbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110660784
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110660784
MMR (mismatch excision repair)
110660784
DSBR (double strand breaks repair)
HR (homologous recombination)
110660784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF4980
Motif
Other DBs
NCBI-GeneID:
110660784
NCBI-ProteinID:
XP_021674914
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MGQWVSPDAIAALLSNPKPDSLTDIPEIIVQITKLEPKGKSYGFDANDGKMKIKAIFNSR
LSSEIISGNIQNLGLIRILDYTVNEIPSKSENYLIITKCEVVSPALAMEIKDEKNEELGE
KKEESGIILKPKQEHEIKGEVKKESSGILLKPKQEMVAKSAAQIVNEQHRNMAPTARMAM
TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRAYKNARGEGCVFNVELTDEDGTQIQATMFN
EAARKFYDKFQLGKVYYISKGTLRVANKQFRTVQNDYEMTLNENSEVEEASNEAAFIPET
KFNFVPIDQLGPCVNSTELVDVVGIVQSVSPTMSIRRKSNNEIVPKRDITIADETRKTVV
VSLWNDLATDLGQELLDLADKSPVVAIKSLKVGDFQGVSLSTLGRSIVQINPDIPESKKL
RCWYDSEGKETSMASVGSGLSPSTKSGGRSMYSDRVSISHMTSNPSLGGDKPAFFSIRAY
ISFIKPDQSMWYRACKACNKKVTEGVGGGYWCEGCQKNDAECSLRYIMVVKVSDASGEGW
VSAFNEEAEKIIGCSADELDKLKSEEEGSSYQLKLKEATWNPHLFRVSVAQNEYNNEKRQ
RITVRAVAPVDFAAESRFLLEDISKMKGSQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaatgggtgagcccagatgctatagccgccttgctttcaaaccccaaaccagat
tcactcactgatatccctgagatcatcgttcagatcaccaagcttgagcctaaaggaaag
tcttacgggtttgatgctaatgatggaaagatgaagataaaagcaattttcaactcccgt
ctgtcttctgagatcatctctggaaacattcaaaacttgggtcttattcgtattcttgat
tatacagtcaatgaaattcccagtaaatcagagaattatttgatcataacaaaatgtgaa
gtggtttctcctgcacttgcaatggagatcaaagatgagaaaaatgaggaattgggtgag
aaaaaggaagaatcaggcataatattgaagccaaagcaagaacatgagatcaagggtgaa
gttaaaaaagaatcaagtggcattcttttgaagccaaagcaagaaatggttgcaaaatct
gccgctcaaatagtaaatgaacagcatagaaatatggctcctacagcacgaatggccatg
acaagaagagttcaccccctcgtttccttgaatccttaccaagggaattggaccatcaag
gtccgagtcacaagcaaaggtaatatgcgtgcttacaagaatgcaagaggagaagggtgt
gttttcaatgtggagttgacagatgaagatggtacacagatacaagcgacaatgttcaat
gaggctgcaaggaaattttatgataaatttcagttgggcaaggtttattacatatcaaag
ggaactcttagagttgctaataagcagttcagaacagtgcaaaatgattatgaaatgact
ttaaatgagaattctgaagtagaagaggcaagtaatgaagcagcttttatccctgaaaca
aaattcaattttgttccaattgatcaattgggtccatgtgttaattcaactgagcttgtt
gatgttgttggaatcgttcaaagtgtttctccaacaatgagcatccgaagaaagagcaac
aatgagattgtcccaaagcgtgacataactattgcagatgagacgaggaagacagttgtg
gtctcattatggaatgaccttgcgactgatttggggcaggaattacttgaccttgctgat
aagtcacctgtagttgcaatcaaatctcttaaagttggagattttcaaggtgtatctttg
tctacgttgggtagaagcattgtacagatcaatccagacattcctgagtcaaagaaactg
agatgctggtatgattctgaaggtaaagagacttcgatggcctcagtaggctctggtttg
agcccttcaaccaagagtggaggaaggtctatgtactctgaccgagtctccatctctcat
atgacaagcaatccctccttaggtggtgacaagcctgcatttttcagcattagagcatat
ataagtttcatcaagcctgaccagagtatgtggtaccgggcttgcaaggcttgcaataag
aaggtgactgaaggtgttggaggtggatattggtgtgaaggatgccaaaagaatgatgca
gagtgtagtttaaggtatattatggtggttaaagtttcagatgcaagtggtgaaggttgg
gtttctgcattcaatgaagaagcagagaagatcattggttgctctgctgatgaacttgat
aaactgaagtcagaggaagaagggagttcataccaactgaaattaaaagaagccacttgg
aatcctcatcttttcagggtcagtgttgctcagaatgagtacaataatgaaaagaggcaa
agaataacagtaagggctgttgccccagttgattttgctgctgaatctagatttttgctc
gaagatatctcaaagatgaaaggttctcaatag
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