Hevea brasiliensis (rubber tree): 110661473
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Entry
110661473 CDS
T05150
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110661473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110661473
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110661473
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110661473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
110661473
NCBI-ProteinID:
XP_021675806
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MQEEPEMVTPGVVLGKAAEVKPGKGAYVAPYRNTEILYVYSSLAGVRRTLSPPPDSPDQR
PIVEIIGHKAQGAVPEPGSVVIARVTKVMAKMASADIMCVGPKSVQEKFTGIIRQQDVRA
TEIDKVDMHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESTAGATMVPISWTE
MQCSLTGQIEQRKVAKVGS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagaaccggagatggtgacaccaggagtggtgttagggaaagcagctgaagtg
aaaccagggaaaggtgcgtacgtggcaccctatcgtaacactgaaatcctctacgtctac
tcctccctcgcgggtgtccgccgcactctgtcgcctccccccgactctcccgaccagagg
ccaattgtggaaataattggacacaaggctcagggtgctgttccagagcctggttctgtt
gtcattgcccgagttactaaagtgatggctaaaatggcatcggctgacattatgtgtgtt
ggtcccaagtctgtgcaagaaaagttcactggcataattaggcaacaagacgtaagagct
actgagattgacaaagtggatatgcatttatcttttcggcctggtgacattgtcagagct
ctagtgttgtcccttggagatgcacgggcttattacctttctactgccaagaatgagttg
ggtgttgtatctgcagagagcacagcaggtgcaacaatggttcccataagctggacagag
atgcaatgctcattgactggccaaattgagcaaagaaaagttgctaaggttggaagttga
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integrated database retrieval system