Hevea brasiliensis (rubber tree): 110661579
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Entry
110661579 CDS
T05150
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03030
DNA replication
hbr03410
Base excision repair
hbr03420
Nucleotide excision repair
hbr03430
Mismatch repair
hbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110661579
03410 Base excision repair
110661579
03420 Nucleotide excision repair
110661579
03430 Mismatch repair
110661579
03440 Homologous recombination
110661579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbr03032
]
110661579
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110661579
Enzymes [BR:
hbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110661579
DNA replication proteins [BR:
hbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
110661579
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
110661579
MMR (mismatch excision repair)
DNA polymerase delta complex
110661579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
110661579
NCBI-ProteinID:
XP_021675935
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MNRNGNTRKRPLPTSQPTPSPPAAKQQATTPAVDDEFVDEDVFLDETLIAEDEENLILRD
MEERQALASRLAKWSRPSLSPEYTSQSRSILFQQLEIDYVIGESHKGLLPDRSGMAAIIR
IFGVTREGHSVCCLVHGFEPYFYISCPPGMGPDDISRFQQILEGRMREMNRNSKVPKFVQ
RIEMVQKRSIMYYQQQPSHPFLKIVVALPTMVASCRGILDKGIHIDGLGMKSFMTYESNV
LFALRFMIDCNIVGGNWIEVPAEKYKKTSKNLSYCQLEFDCLYSELISHAPEGEFSKMAP
FRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEDQPFIRNVMTLNSCSPIVGVDVM
SFVTERDVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAETLGIAEFPLLGRVRNSRV
RVKDTTFSSRQYGTRESKEVTLEGRVQFDLLQAMQRDYKLSSYSLNSVSAHFLSEQKEDV
HHSIISDLHNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPLSFLLSR
GQSIKVLSQLLRKAKQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLY
PSIMMAYNLCYCTLVTPEDVRKLNIPPECVNRTPSGETFVKSNLQKGILPEILEELLAAR
RRAKADLKEAKDPLVKAVLDGRQLALKVSANSVYGFTGATIGQLPCIEISSSVTSYGRQM
IEHTKKLVEEKFTITGGYEQNAEVIYGDTDSVMVQFGVPTVTEAMKLGREAAEYISGTFI
KPIKLEFEKVYYPYLLISKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNLVNECL
HKILIDRDVPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMR
KRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPLLR
IFEPILKNASKELLHGSHTRSISISTPSNSGIMKFAKKQLSCIGCKALISNSDRTLCSHC
KGREAELYCKTVSQVSELELLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDM
AEAKRQLDRVKFRLAFGSWEVQLGDKLTMVGTPYAVYICYLFH
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaaatggcaacaccaggaagcgcccactgccgacatcacaacccacgccatcg
ccaccagcagcgaagcagcaagccacgacaccagccgtagacgacgaattcgtggatgag
gatgtcttccttgacgaaaccctcattgcggaagacgaagagaatctcatcctccgcgac
atggaagagcgtcaggcccttgcatctcgccttgccaagtggtctcgcccgtccctctct
ccggagtacacttcccaatctcggagcattctatttcagcagttggagattgattatgtg
attggagagagtcataaggggctgctgcctgataggtcaggaatggctgcgattatcaga
attttcggggtcacaagggaaggacatagtgtttgctgcctagttcacggatttgagcca
tatttttacatcagttgccctcctggaatgggtcctgacgacatttctcgttttcaacaa
attcttgaggggaggatgagggagatgaataggaacagtaaagtgcccaaatttgtccag
cgaatagaaatggtccaaaaaaggagcattatgtattaccagcaacagccttcacatcct
tttctaaagattgtagttgcattgccaacaatggtggccagctgtcgcggtattcttgac
aaaggaatacacattgatggccttggtatgaagagcttcatgacgtatgaaagcaatgtt
ctctttgccctccgcttcatgattgattgcaacattgttggtggaaattggattgaagta
cctgctgaaaaatataagaagacatcaaagaatctgtcctattgccaattagagtttgat
tgcttgtattcagaattgatcagccatgccccagaaggtgaattctcaaaaatggctcca
tttcgcattttaagtttcgatattgagtgtgctggtcgtaaaggtcattttcccgagcct
acccatgatcctgttattcaggtggccaatctagttactttgcagggagaggaccagcca
tttattcgtaatgtcatgactttaaactcatgctctcctatagttggtgtagatgtgatg
tcatttgttacagaaagagatgtcctactggcttggagggattttatccgtgaagtggac
ccagatattataattggatataatatctgcaaatttgacttgccgtatctcattgagaga
gctgaaactttgggaatagcagaatttcctctattgggccgtgtcaggaatagcagggtt
cgggtcaaagatacaacattttcatcaagacaatatggtacaagggaaagcaaagaagtt
acattggaagggagagttcaatttgatttgcttcaggcaatgcaacgagattataaatta
agttcttactcattaaattctgtctcagcacactttctctctgagcagaaagaagatgtc
caccattcaataatatctgatcttcataatggtaatgcagaaactaggaggcggcttgcc
gtatattgtttgaaggatgcttatctcccacagcggctcttggacaagctgatgtttatt
tataattatgtagaaatggctcgtgtcactggcgtcccgttatctttccttctttccagg
ggacaaagtatcaaggtactttctcaactcttgaggaaggctaaacagaagaaccttgtt
attcccaacgtcaaacaggcaggatctgaacaaggaacatatgaaggcgcaactgttttg
gaagctagagcaggattctatgaaaagccaattgcaacactagattttgcatctctgtat
ccttcaataatgatggcatataatctatgttactgcactctggtgactcctgaagatgtt
cgtaaactcaacatcccacctgaatgtgtcaacagaactccatctggtgaaacatttgta
aaatcaaatttacaaaagggaattcttcctgaaattcttgaagaactattagcagctcga
agaagagcaaaagcagatttgaaggaagccaaggatccacttgtgaaggctgttctagat
ggtcgacaactggctttgaaggtaagtgcaaattctgtctatggatttacaggagcaact
attggccaattgccatgtatagagatatcctctagtgttacaagctatggtcgacaaatg
attgaacacaccaaaaagcttgtggaagaaaaatttaccataacagggggatatgaacaa
aatgcagaggttatatatggggacacagattcagttatggtacaatttggtgtgcctact
gtcacagaagcaatgaagttgggaagagaagctgctgaatacatcagtggaactttcata
aaacccatcaagctagaatttgagaaggtttattatccatatctgttgattagcaagaag
agatatgctggtttattctggactaatccagacaaatttgacaaaatggatactaaaggc
attgaaacagttagaagagacaattgtttattggtcaaaaacctggtaaatgagtgtctt
cacaagatattaatagacagagatgtgcctggtgcagttcaatatgtcaagaataccatc
tctgatcttcttatgaaccgtatggatttgtcacttctggttattactaagggtttgaca
aagactggagatgattacgaagttaaggcggctcatgttgaacttgctgaacgcatgcgc
aagagagatgctgccactgctccaaatgtcggggatcgtgtaccttacgtcattataaaa
gctgcaaaaggtgccaaggcttatgaaagatcagaagatcctatctacgttctggaaaat
aatataccaatagatcctcagtattaccttgaaaaccaaattagcaagccacttttaaga
atttttgagcccattttgaagaatgccagcaaggaactccttcatggaagtcatacaaga
tctatttccatctccactccttcaaatagtggcattatgaaatttgctaagaaacaactc
agttgcattggctgcaaagccctaattagtaattcagatcgaactctctgctcacactgt
aagggaagagaagcagaattgtactgcaaaacagtttctcaagtgtctgagctagagttg
cttttcgggaggctgtggacacagtgccaagagtgccagggctctcttcatcaagatgtt
ctttgcaccagtcgggactgcccaatattttatcggagaaagaaggcacaaaaagacatg
gctgaagccaaacggcagttggatagggtgaaattcagattggcttttggtagttgggaa
gttcaactaggggacaagcttacaatggttggaactccatatgctgtctatatatgctat
ttgtttcactga
DBGET
integrated database retrieval system
