Hevea brasiliensis (rubber tree): 110661966
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Entry
110661966 CDS
T05150
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03420
Nucleotide excision repair
hbr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110661966
09124 Replication and repair
03420 Nucleotide excision repair
110661966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hbr04121
]
110661966
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110661966
Ubiquitin system [BR:
hbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110661966
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
110661966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_RFWD3
WD_LRWD1
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR11_2nd
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
110661966
NCBI-ProteinID:
XP_021676513
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MWREIRDREAGKTRPNSFTNRIKSNRIADLQLSNCKDIVSPHRGSINSLQVDLTEGRYLL
SGASDASAACFDIQRATDYEGRGLIAKHKCLFAVDKQHESGHKFAISSAIWYPVDTGLFI
TGSYDHYIKVWDTNTTQAVVNFKMPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASG
AFAHTLSGHRDGVMTVEWSTSSEFVLITGGCDGAIRFWDIRRAGCFRVLDQSRSQLGRRP
PILACSATNKVSISKALSAGQNLPSKPRVHQKKSAAGNGIKQSPLGRTPAKGPLRQRLHP
GMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRMRLWDVESGCNTLVNFETVRLQTS
KAIQLATTQDSSLVFVPCMTAVKAFDVWSGMTSMTFRGHYEYVNCCWFNSQDQEIYTGGN
DRQILVWSPSRLIANEMDTGPAEDQDNWSD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggaaatcagagacagagaagcgggaaaaacccgccctaattccttcaccaat
cgaattaaatcaaacaggatcgctgatctccagctctctaattgcaaggacatcgtctca
cctcacagaggatcaatcaactctcttcaggtcgatttgacagaggggcgatatttgtta
tctggtgcatcagatgcatcagccgcatgttttgatattcagcgggctacggattatgag
ggaagaggtcttattgctaagcacaagtgcttatttgctgttgacaagcaacatgaaagt
ggacataaatttgccatttcttctgctatatggtatcctgtggatacggggcttttcatc
actggttcttatgatcactatataaaagtctgggatactaataccactcaggcggtggtg
aattttaaaatgcctggaaaggtttatagaactgcgatgtccccattagcgacatctcac
atgctgatagctgcaggaactgaagatgttcaagttcgactttgtgatattgcttcaggt
gcatttgcccacacgctgtctggtcaccgtgatggtgttatgacagtggaatggtcaact
tcaagtgagtttgttttaattactggtggatgtgatggtgccatacgattttgggatatt
agacgtgctggatgtttccgtgttttagatcaatctcggtctcaacttgggagacgccca
ccaatccttgcttgctctgcaacaaataaggtttcaatttcaaaggccttatcagcaggt
caaaatttgccgtcaaaaccacgggtacatcaaaagaaatctgctgctgggaatggaata
aagcagtcacctcttggtcgaactccagccaagggacctctcaggcagagattacatcca
ggaatgttgtctagtcaggatcgtgccactgcacattatggtgctgttactggccttaaa
ataactgaagatggaatgtatcttctaagtgcaggatcagattcaagaatgaggttgtgg
gatgttgaatctggctgcaatacacttgtgaactttgaaactgtacgcctacagactagc
aaagctattcaattggccacaacacaagattcatcacttgtttttgttccatgcatgaca
gctgtgaaagcatttgatgtgtggtcgggtatgacatccatgacatttcgtggtcattac
gagtacgtgaactgttgctggtttaattcacaagatcaggaaatatatacaggtggaaat
gacagacaaattctggtctggtctccgtccagattgattgctaatgagatggacacagga
ccagctgaggatcaggataactggagtgattga
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