Hevea brasiliensis (rubber tree): 110662006
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Entry
110662006 CDS
T05150
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03013
Nucleocytoplasmic transport
hbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110662006
03015 mRNA surveillance pathway
110662006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110662006
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110662006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110662006
NCBI-ProteinID:
XP_021676565
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MAKPKRGRTSPSGSGSGSSSRSRSNSRSRSYSGSDSRSSSRSRSLSSRSRSRSFSSSSSP
SRSLSSASRSPPAQRKSPAAEVAKRGRSPPPQSRKISPPRKTSPIRESLVLHIDSLSRNV
HEGHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFRTRADAEKALLYMDGAQIDGNVV
RARFTLPPLQKVSPPPKPIAAAPKRDAPKTDNASVDVEKDGPQRQREPSPRRKPLASPRR
RSPVTRRGGSPRRLLDSPSRQRVDSPSHRRIESPYRRGDTPPRRRPASPARGRSPSPPRR
YRSPARGSPRRIRGGPVRRRSPPPPRRRTPPRRARSPPRRSPLRRRIRSPIRRPARSRSR
SLSPRSRGRAPAARRGRSSSHSRSPSPRKVTRRISRSRSPRRPLRGRSTSNSKSSSSPLR
NP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccaaagcgaggccgtacctcgccttctggttctggttcgggctcgtcctcc
cggtcccgctccaattcacggtcacgctcttactccggttcagattctcgctccagctca
cgctcccggtctttgtcctctcgatctcgctccagatcgttctcttcatcctcctcccct
tctcgcagtctcagctctgctagccgcagccctcctgctcagagaaagagtcctgctgct
gaagtggctaaacgaggccgttctccaccaccgcaatctagaaaaatttctccgccaagg
aagacttctcccattcgcgagtctcttgttcttcacattgactcgctcagcaggaatgtg
catgagggccatttaaaagagatattcagtaactttggtgaagttgtacatgtggagctg
gcaatggaccgtactgttaatcttccaaaaggatatggatatgttgaattcaggacaagg
gctgatgctgagaaggccctactatacatggatggggcccagattgatggcaatgttgtt
cgagcaaggttcacattaccgccgctgcagaaggtttcaccacccccaaaacctattgct
gctgctccaaagcgagatgctcccaaaactgataatgcaagtgtagatgttgagaaggat
ggaccacaaaggcaaagagaaccttctccccgtcggaaacctctagcctctcctcgaaga
agatcccctgttactcgaagaggtggatcccctagacgtcttctagattctccttcacgt
caacgtgtagattctccttcacatcggcgaatagagtctccttatcgtcgtggggataca
ccaccaagacggagaccagcatccccagctagaggtcgtagtccatctccaccaaggcgt
tatagatcccctgcaaggggctctcccagaaggattcgcggcggccctgttcgcagacgt
tctcctcctcctccaaggcgacgcacacctcctagacgagcccgtagtcctccaagaagg
tccccacttcgtcgacgtatccgatctccaattcgtaggcctgctcgctcgcgttcaaga
tcactttcaccgaggagcagaggccgagctcctgctgctagacgtgggaggtcatcatcc
cattccaggtcacctagtccacgcaaggtcacccgcaggatatcaaggagccgtagtcct
agaaggcctttgaggggaagaagcaccagcaacagcaaaagcagcagctcaccacttcgt
aacccatag
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