Hevea brasiliensis (rubber tree): 110662309
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Entry
110662309 CDS
T05150
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110662309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110662309
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110662309
mRNA cycle factors
Common to processing body (P body) and stress granule
110662309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
110662309
NCBI-ProteinID:
XP_021676935
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MMIVQMDKMSAPSSRERAQRLYEKNIELENKRRRSAQARIPSDPNAWQQMRENYEAIVLE
DHGFSEQHNIEYALWQLHYRRIEELRAHFSVALANTGSNTSQGVKVPARPDCITKIRLQF
KTFLSEATGFYHDLILKIRAKYGLPLGYFEDSDNRVVLEKDAKKSADMKKGLISCHRCLI
YLGDLARYKGLYGEGDSKPREYAAASSYYLQAASLWPSSGNPHHQLAILASYSGDELVAV
YHYFRSLAVDNPFTTARDNLIVAFEKNRQSYTQLLGDAKGSMAKDSSMRLTSKGRGKGEA
KPAVKDTNVEANVVNERSPNIREIYKSFCIRFVRLNGILFTRTSLETFDAVLSLVSGEFC
ELLSSGPEEQLNFGADAVENALLIVRLISILIFTVHNVKREAEGQTYAEIVQRTVLLQNA
LTAVFELMGHVLERFVQLRDPSTSYLLPGILVFVEWLACCPDVASGSDADDKQATVRLKF
WNHCILFLNKVLSFWSMSLDDNEDDTCFYNMSHYEEEETGNRLALWEDFELRGFLPLLPA
QTILDFSRKHSFGSEGSKERIARVKRILAAGRALANIARIDQKTVFYDSRMKKFVIGVEP
QISDGGMLTFESGLPKTGDVVQEIQPQKTINVGVLKPNAQPYIEGDEEDEVIVFRPAATE
KRNEGLSPKWVPYDGMKQNQDVSADLKFYGGSVSSPLDLLQHSAFDAGSQISASSGINVS
QHLQPIQPPASKWLMEEAASLANSLKAIRFTENGHVTEHELPKDLGIGHPAAHSLPIQPA
NVNTSIFYNQAKVPEAVIPSKVDVITESLSVKTSAALPAGLRKTPVSRPVRHLGPPPGFS
HVPLKQVNEAVSGSDLMTENSLTDDYSWLDGYQLPSSTRGSGFSNATTITSQAMHQCINS
SNGLTGTVSFPFPGKQVSSGQFQTEKQKGWQNYHAFEHLRLQQEQLQQQLLNGNQQFTPM
SEQYHGKSIWGGRYIV
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgtacagatggataaaatgtctgctccttcctcaagggagcgtgcgcaacgt
ctttacgaaaagaatattgagctggagaataagcgtcggaggtcagctcaggcaagaatt
ccttcagatcccaatgcctggcaacagatgcgggagaactatgaagctatagttctcgag
gatcatggtttttctgagcagcacaatatagaatatgctctttggcagttgcattatagg
cgcattgaggaactaagagctcacttcagtgttgctctagctaatactggctcaaataca
tctcagggagtgaaagttcctgctcgacctgactgtattacgaaaataaggcttcagttt
aaaacatttctttcagaagcaactggattctatcatgatctaatcctgaaaatcagagct
aaatatgggcttcctctggggtactttgaggattcagataatagagttgtcttggaaaaa
gatgcgaaaaaatcagctgacatgaagaaaggtttgatctcctgtcaccgctgtttaata
tacttgggtgaccttgcaaggtacaagggactatatggggagggtgactcaaagccacgc
gaatatgctgctgcttcaagttactatttacaagctgcatccttatggccatcaagtggg
aacccccatcatcagcttgctattttggcttcctactcgggagatgagttggtggcagtg
tatcactattttaggagtctggctgttgataatccctttacaacagcaagagataacttg
attgttgcttttgagaagaatcgacagagttacactcaactgcttggtgatgctaaagga
tctatggccaaggattcatccatgcgcttgaccagcaaggggagagggaaaggggaagca
aaacctgcagttaaagacacaaacgtggaagccaatgttgtcaatgaaaggtcacctaat
atccgtgagatatataaatcattttgcattcgatttgtccgcctgaatggtattcttttc
acacgcaccagcctggaaacttttgatgcagttctctcattggtcagtggtgaattctgt
gagctgctttcttctgggccagaagagcagctaaattttggtgcagatgctgttgaaaat
gcccttctcattgtacggcttatatctattcttatattcacagttcacaatgtgaaaaga
gaggccgagggtcagacatatgcagaaattgtacagcgtactgttctactacagaatgca
cttactgcagtttttgagttaatgggacacgtgttagagaggtttgtgcagctgcgtgat
ccttctacaagttatctcttacctggcattcttgtttttgttgaatggttggcctgttgc
cctgatgttgcatcgggcagtgatgctgatgataaacaggccactgttagattgaagttt
tggaaccattgtatattgttcttgaacaaggtcttgtcgttttggtcaatgtctctagat
gataatgaagatgatacatgcttttataacatgagccattatgaagaagaggaaactgga
aatcggcttgctttatgggaggattttgagttgagaggattcctgccacttcttcctgca
caaaccattttggacttttcaaggaagcactctttcggaagtgaaggcagtaaggaaagg
atagctcgtgttaaaaggattctagctgctggaagggctttagcaaatatagctaggatt
gatcaaaaaacagtattttatgattcaaggatgaagaaatttgtcataggtgtggagcct
caaatttcagatggcggcatgttgacttttgagtctggtctgccaaaaactggtgatgtg
gtgcaagaaattcagcctcagaaaaccattaatgtgggagttttgaagcctaatgcacag
ccatatatagaaggggacgaggaggatgaagtaattgttttcaggcctgcagcaacagag
aagcgaaatgaagggcttagtccaaaatgggtcccctatgatggcatgaaacagaatcaa
gatgtatctgctgatctgaaattttatggtggttctgtttcatctcctcttgatctgctg
cagcattctgcttttgatgcaggttctcaaatatctgcatcctctggcattaatgtttcc
cagcatctacaacctattcaaccgcctgcctcaaagtggttaatggaagaagctgcttcg
cttgcaaatagcttgaaggctattaggttcacagagaatgggcatgtaacagagcatgag
ttgccaaaagatttaggcataggccatcctgctgcacattcacttcccatccaacctgca
aatgttaatactagtattttctacaatcaggcaaaagtgccagaagctgtgattccatca
aaggttgatgttatcactgaaagtttgtctgtgaagacatcagcagctttgccagcaggc
ttgaggaaaactccagtcagtcgacctgtaaggcaccttgggcctcctccaggctttagt
catgttcctcttaaacaagtaaatgaagctgtttctggctcagatttgatgactgagaat
tcattgacagatgattatagttggttggatggttatcagttgccatcgtcaacaaggggg
tctgggttcagtaatgccactactataacttctcaagcaatgcatcagtgtatcaatagc
agtaatggcttgactgggacagttagcttcccttttcctggaaaacaggtgtcatcaggc
caattccagactgaaaaacagaaaggctggcagaattaccatgcctttgagcatctaaga
ttacagcaagagcagctgcagcaacaactcttgaatggaaatcagcaatttactccaatg
tctgagcaatatcatggaaagtccatctggggtggtcgatatattgtgtga
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