Hevea brasiliensis (rubber tree): 110663104
Help
Entry
110663104 CDS
T05150
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110663104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110663104
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110663104
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110663104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
ScoMcrA_N
Motif
Other DBs
NCBI-GeneID:
110663104
NCBI-ProteinID:
XP_021678027
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MMDQVFVGLPSQNFRRVQHFSYLAFNSRSNTTPSLFPSFQATSSTPQPPPPSLPFPIYNC
HSVLSPSSPKPPTTSQSSLQSSLLSSYALTFFFLIFRMILQDSSMDSKPIIIREVWSANL
ECEFQLIRDLIDDFPFISMDTEFPGLIFRPSLDPTKPYSQQRRPSDHYKILKSNVDALNL
IQVGLTLSDSNGNLPDLGTANRFIWEFNFRDFDVSRDAHSPESIDLLRRQGIDFEKNKEE
GVDSARFAELMMSSGLVCNDSVSWITFHSAYDFGYLVKILTRRVLPCSLLDFLKLLRVFF
GNRVYDLKHMIKFCDSLYGGLDRVARTLDVNRAVGKCHQAGSDSLLTWHAFQKMRDVYFL
KDGPEKHAGVLYGLEVF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccaagtcttcgttggattgcccagtcaaaatttccgacgcgttcagcatttt
tcttatctagcattcaactcacgctcaaataccacgccgtctcttttcccctccttccaa
gcaacatcctccactccccagcccccaccaccatcactcccttttccaatatataactgc
cactctgtgctctctccctcctcgccaaaaccccccactacttcacaatcatcacttcaa
tcttctctgctctcatcatacgcactcacttttttctttttgatctttagaatgattctt
caagactcaagcatggactccaagccaattatcatccgagaagtctggtctgctaattta
gaatgcgaattccaactcatccgcgatcttattgatgactttcctttcatttccatggat
accgaatttcctggacttattttccgcccttctctcgaccccacaaagccttactcccag
caacgccgcccctctgatcactacaaaatccttaagtctaacgtcgacgctttgaatctc
atccaggtgggcctcactctctctgactccaatggcaacctccccgacctcggcaccgca
aatcgattcatttgggaattcaattttcgagatttcgacgtgtctcgcgatgctcactct
cccgagtccatcgatttgcttagacgtcagggcattgacttcgagaaaaataaagaagaa
ggggttgactccgctcgttttgccgaattgatgatgtcttcaggactcgtgtgcaatgat
tcagtgagttggattacgtttcatagcgcctacgatttcgggtatttagtgaagattttg
acacgtcgagttttgccctgtagtttattggattttttgaaattgttaagggtgttcttc
gggaatagagtttacgacctcaaacacatgataaagttctgtgatagcttatatggtggt
ttggatcgggtagctcggacactcgacgtaaatcgagctgttggcaaatgccaccaagcc
ggatcagacagcttgttgacatggcacgcatttcaaaagatgagggatgtctattttctg
aaagatgggccagaaaaacatgctggagttttatatggattggaggtgttttga
DBGET
integrated database retrieval system
