Hevea brasiliensis (rubber tree): 110663260
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Entry
110663260 CDS
T05150
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110663260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hbr04131
]
110663260
Membrane trafficking [BR:
hbr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110663260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Vps39_C
CNH
Clathrin
Vps39_1
TPR_Vps41
TPR_PEP5_VPS11
Motif
Other DBs
NCBI-GeneID:
110663260
NCBI-ProteinID:
XP_021678213
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MAKPDPSARTVLEPLSNIDLSSYSVTSLRSLAVSSISDAQSLIYIGTFSGSLLLLSISTG
DDATATATATASAPKDVQSALDFDASKRNVSFLRSVSFGDSPIETLHVLPEIGKVLVLCD
GYMFLVDTLLSQSVKKLSFSKGVCAIAKRIRSSELESTNLLGISGNNLESSSASQRILQK
LGGGIRANGVKTKEPVQQSEGNNVFAVVIGKRLILVELVFSNNRIGKTDRDIDSSNGSFV
ILKEIHCIDGVKTIVWLNDSIIVGTVHGYSLFSCVTGLSGVIFSLPDISSPPQLKLLWKE
RKVLMLVDNVGIVVNEHGQPVGGSLVFRSSPDSIGELSPYVVLVRNGKMELYNKRSGSCI
QTVTFGGEGVGPCVVANEEVGIGKLVAVATPTKVTFYCKVSSEEQIKDLLRKKNFKEAIS
LVEELEYEGEMSNEMLSFVHAQVGFLLLFDLHFEEAVNHFLQSETMQPSEVFPFIMRDPN
RWSLLVPRSRYWGLHPPPAPLEDVVDDGLMAIQRAIFLRKAGVDTAVDDDFILNPPTRSN
LLESAIKNIIRYLEVSREKELTLSVQEGVDTLLMYLYRALNRVDDMEQLASSENSCIVEE
LETLLDDSGHLRTLAFLYASKGMSSKALAIWRILARNYSSGLWEDPVVETDLQDGSKNIV
SGREIAAIEASKILEELSDQELVLQHLGWIADINPVLAVEVLTSKKRVKQLLSDEVIAAI
DPKKVEILQRYLQWLIEDQDSIDTQFHTLYALSLAKSAIEAFEVESISKNPDDERLEGAK
FSDFGMKSIFQSPVRERLQIFLLSSDLYDPEEVLDLIEGSELWLEKAILYRKLGQETLVL
QILALKLEDSEAAEQYCAEIGRPDAYMQLLDMYLDPQNGKEPMFKAAVRLLHNHGESLDP
LQVLETLSPDMPLQLASDTILRMLRARLHHHCQGQIVHNLSRAIDVDARLARLEERSRHV
QINDESLCDSCHARLGTKLFAMYPDDTIVCYKVWQDALQIRQNGFHCIALVRQDLVVSSL
HSFARICVSVVKVSPLLSQAGTLSEMYY
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccgatccctctgctcgaaccgtcctagaacctctctctaacattgacctc
tcctcctattctgtcacttcactccgatctcttgccgtctcttcaatttccgatgcacaa
tccctaatctacattggcaccttctctggatctcttcttctactctccattagcactggg
gatgatgccaccgctaccgctactgctactgcttctgcacccaaagacgtgcagtctgct
ctcgatttcgatgcttctaaaagaaatgtttcctttttgagaagcgtttctttcggggat
tcacccatagaaacgctgcatgtgcttcctgagattgggaaggttcttgttctctgtgat
ggttacatgtttttggttgatactcttttgtctcagtctgttaagaaattgagtttttcc
aagggagtttgtgcaattgcaaagaggattcgaagcagtgaattggagagcactaattta
ttgggtatttctggtaataatttggagtcttcaagtgccagtcagcggattttgcagaag
ttgggaggtgggattagagctaatggagtaaaaactaaagaacctgtgcaacagagtgaa
ggtaacaatgtttttgctgttgtaattggcaaaagattaatacttgtagagcttgttttc
agcaataataggataggtaagactgaccgagacattgatagttcaaatgggtcttttgta
attttgaaagagatacattgtattgatggggtgaaaactatcgtgtggcttaatgattcc
ataattgtgggtaccgtccatggatatagtttgttttcctgtgttacggggctgagcggt
gtgatattttcattaccagatatatctagcccaccgcagcttaaattgttatggaaagag
aggaaggtgttaatgttggtagacaatgttggaattgttgttaatgagcatggccagcca
gttggagggagcttggttttccgtagcagtccagattcaattggggaattatctccttat
gtagtgcttgttaggaatgggaagatggagctgtataataagagatcaggtagttgtatt
cagacagttacttttggtggggaaggagttgggccatgtgttgttgccaatgaggaagtt
gggattggaaaacttgttgctgttgctacacccaccaaggttaccttctactgcaaagta
tcttctgaagaacaaatcaaggatcttttgagaaagaaaaacttcaaggaagccatctcc
ttggtggaggagcttgagtatgaaggtgaaatgtccaacgaaatgctatcctttgttcat
gctcaagtgggtttcctcttgctttttgacttgcattttgaggaagcagtaaatcacttt
ctccagtcagagacaatgcagccatctgaagtatttccatttataatgcgagatccaaat
cgctggtcattgctggttcctaggagccggtattggggcttgcatcccccccctgcacct
cttgaagatgttgtagatgatggattgatggctatccaaagagctattttccttaggaaa
gcaggtgtagatacagcagtagatgatgattttatattgaatccacctactagatctaat
ttacttgagtcagcaatcaagaacattatcagatatctggaagtttctcgtgagaaagag
ttgactttgtctgtgcaggaaggagttgacacacttttaatgtatctttatagagcttta
aatcgggttgatgatatggagcagcttgcttcttcagaaaacagttgtattgtggaggag
ttagaaactctattagatgactctgggcatttacggactcttgccttcttatatgcaagt
aaagggatgagctcaaaggctcttgccatatggcgcattctggcaagaaattattcttct
ggtctatgggaagaccctgttgtggagactgacttgcaggatggcagtaaaaatattgtt
tctggtagagagattgctgcaattgaggcatcaaaaattctagaggagttgtctgatcaa
gaattggttttgcagcatcttggatggattgcagatattaatccagttctagcagttgaa
gttttgacttctaagaaaagagtgaagcagctattgtcagatgaagtgattgctgccatc
gatccaaaaaaggttgaaatccttcaaaggtatctccagtggctgattgaagatcaggac
tctattgacacccaattccacacattatatgctctctcacttgcaaagtcagcaatagaa
gctttcgaagtggaaagtatctccaaaaaccctgatgatgaaaggttagagggggcaaaa
ttttctgatttcggtatgaagtcgatctttcagagtcctgtacgtgaaaggttgcagata
tttttactatcatcagacttatatgatccagaagaggtccttgacttgattgaaggatca
gagttatggctcgaaaaggctattctatacagaaagttagggcaagagacattggtgctt
caaattttggccctgaagctggaggacagtgaagctgctgaacaatattgtgcggagata
ggcagaccagatgcatatatgcagttacttgatatgtatttggatccacaaaatggtaaa
gagcctatgtttaaggctgctgttcgccttctgcataatcatggagaatcgctggatccc
ttgcaagttttggagacattgtccccagatatgccccttcaacttgcatctgatacaata
ttacgaatgttgagggctcggcttcatcatcattgtcaaggacaaattgtacataatctg
tctcgtgctatagatgttgatgcaagacttgcaagattggaggaaagatcacggcatgtg
cagattaatgatgagagcctctgcgactcttgtcatgcacgccttggtacaaaactcttt
gctatgtacccagacgataccattgtctgttacaaggtttggcaagatgcactgcaaatc
cgtcagaatggttttcattgcattgcactcgttcgccaggatctggttgtttcttcatta
cactcgttcgccaggatctgtgtttccgtcgtcaaggtgagtccacttctgtcacaggcc
ggaactttaagcgagatgtactattaa
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integrated database retrieval system
