Hevea brasiliensis (rubber tree): 110663432
Help
Entry
110663432 CDS
T05150
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110663432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110663432
03012 Translation factors [BR:
hbr03012
]
110663432
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110663432
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110663432
Translation factors [BR:
hbr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110663432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
Dicer_dimer
NACHT
T2SSE
AAA_11
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
110663432
NCBI-ProteinID:
XP_021678411
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MLPPPPSHSLLLNSPSLQIPFTSHPRTLQPSLFHCPTSSTTIAMKDRPRSSYGAVYVPPH
QRLRSVITPPSYSSSSVAAASPIDSKVSKNRSSALSPIHSSPVPYFHQQQVQQRRNSAVD
SNHFNNNKNNNDNNNHRFISAYDDGISDEGSDREVECSMVPAGASLSNNIEEWRQKLTLL
LRDKEKQELVSREKKDRRDFEQIATMASRMGLYSHLYVKVVVISKVPLPNYRFDLDDKRP
QREVSLPFGLQRRVDYYLGEYLFQKSKTKERFPDISFSRSSSSSILATDEGLFEQPKLPA
SSKAAMEKILWQRSLQLRDQQHAWQDSPEGRKMLEFRKSLPAYKEKDAILTAISQNQVVI
ISGETGCGKTTQIPQFILESEIESVQGAGCSIICTQPRRISAMSVSERVASERGEKLGEC
VGYKVRLEGIKGRDTHLLFCTTGILLRRLLVDRNLKGITHVIVDEIHERGMNEDFLLIVI
KDLLPRRPELRLILMSATLDAELFSSYFGGARILRIPGFTYPVRTHFLENILEMTGYKLT
LYNQIDDYGQERVWRTSKQAPRKRKSQIASAVEEALRAADFKEYGSQTRESLSCWNPDCI
GFNLIEYLLCNICENERPGAVLVFMTGWDDISSLKDKLLSHPILGDPSQVLLLACHGSMA
SSEQRLIFDEPKDGVRKIVLATNITETSITINDVVFVLDCGKAKETSYDALNNTPCLLPS
WISKVSAQQRRGRAGRVQPGECYHLYPRCVYEAFAEYQLPEILRTPLQSLCLQIKSLKLR
SISEFLSRALQSPELLAVQNAIEYLKIIGALDENENLTVLGRYLTMLPMEPKLGKMLVLG
AIFNCLDPILTVVAGLSVRDPFLTPMDKKDLAEAAKSQFSRDYSDHLALVRAYEGWKDAE
RDFAGYDYCWKNFLSVQSMKAIDSLRKEFFTLLKDAGLVDSNTTICNAWSHEEHLIRSVI
CYGLYPGLSSVVHNEKSFSLKTMEDGQVLLYSNSVNARESKIPYPWLVFNEKIKVNAVFL
RDSTAVSDSVLLLFGGSMSKGDIDGHLKMLGGYLEFFMKPAIAEMYQTLRRELDELIQTK
LLNPRMDIHVYHELLCAIRLLLSEDKCDGKFVFGNQVLKPSKISVMSTQPALVSRTESGP
GGDNSKSQLQTLLTRVGYAAPTYKTKQLKNNQFRATVEFNGMQIMGQPCNNKKSAEKDAA
VEALQWLMGGTQTGHEYVNHMSMLLKKSKKDHY
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctccctcctcccccttctcattctcttcttctaaattcgccttctctgcaaattcct
ttcacttcacatcccagaacccttcaaccctcactcttccactgccccacctcttccacc
actatagcaatgaaggaccggccacgttcctcgtacggtgctgtttatgttcctccacac
caacgtctgcgctccgtcatcaccccgccgagttatagctcctcctccgttgccgctgct
tctccgattgactctaaagtctctaaaaatcgaagctccgctttaagccctatacacagc
tctcctgtaccttatttccaccagcagcaagtgcagcagcggaggaacagtgctgttgat
agtaatcattttaataataataagaataataatgataataataatcataggttcatttct
gcctacgacgatgggatctctgacgaaggatccgatcgtgaggtggaatgctcgatggtc
ccggctggggcttccctttctaataacattgaagagtggaggcagaagctaaccttgctt
ttgcgagacaaggagaagcaagagttggtctcaagggaaaaaaaggacagacgtgatttt
gagcaaatagcaactatggcaagcagaatgggtttgtatagccatctatatgtaaaagtt
gttgtaattagtaaggtcccactgccaaactacagatttgatttggatgataagcgtcca
cagagagaggtgagcttaccttttggtttgcaaagaagagttgattactatcttggagaa
tacctctttcagaagtccaagactaaggaaagatttccagatatttccttttctagatca
agcagcagcagtattctagctactgacgaagggctttttgagcaaccaaagctaccggct
tccagcaaggctgcaatggagaaaattctatggcagagaagtttgcaactgcgggatcag
cagcatgcttggcaggattctccagaaggcagaaaaatgctggaatttcggaaaagtctt
cctgcctataaagagaaagatgcaatattgactgccatttcacaaaatcaggtggtcatt
atctcaggtgaaactggctgtggcaagaccacacaaattccccagttcatattagaatca
gagatagaatctgtccaaggagctggttgtagtattatatgtacacagccaagacgaata
tctgctatgtctgtttctgaaagagttgcttcagaaaggggggagaaattgggtgaatgt
gttggatataaagttcggcttgaaggtataaaaggaagagatacccaccttctgttttgc
accacaggcatcttgttgaggagattgcttgttgatagaaatttgaagggcataactcat
gttattgtggatgagattcacgaacgtggaatgaatgaggactttctgcttattgtcatt
aaagatctccttccccgtcggccagaactgaggctgattctgatgagtgcaacccttgat
gcagagcttttctcatcctactttggtggagctcgaatacttcgcattccaggttttaca
tacccagtgcgaactcattttctggaaaatatcctggaaatgaccggttacaaattaacc
ttatacaaccaaattgatgattatggccaagaaagggtgtggaggacaagtaaacaagct
ccaagaaagaggaagagccaaattgcttctgctgttgaggaagcactaagagctgctgat
ttcaaggagtatggttcccaaactcgagagtctttgtcttgttggaatcccgattgcatt
gggtttaatctcattgagtatcttttatgtaatatatgtgagaatgagaggcctggtgct
gttctagtttttatgactgggtgggatgacataagttctctgaaggataagctcctatca
catcctattttaggagatccaagtcaagtgttgttgctcgcttgccatggttctatggct
agctcagagcagagattaatatttgatgagcccaaagatggtgtgaggaaaatagtgcta
gctactaatattactgagacgagcatcacaattaatgatgttgttttcgtacttgactgt
ggaaaggcaaaggagacttcatatgatgccctgaataatactccttgtctgcttccttcc
tggatttctaaggtgtctgctcaacaaagaagaggaagagctggccgcgttcaaccagga
gaatgttaccatctttatcctagatgtgtctatgaagcctttgcagagtatcagttacca
gaaattttgaggactcctttgcagtctctctgtctgcaaatcaaaagtttgaaactcaga
agtatttctgagtttctctcaagggccttgcagtcacctgagttgttggcggttcaaaat
gctattgaatacttgaaaatcattggggccttggatgagaacgaaaatttgactgttctg
ggacgatatttgactatgcttcccatggagcctaaacttggaaagatgctcgtattaggt
gctatcttcaattgcctggatccgatattgactgtcgttgctggccttagtgttagagat
cctttcttgacaccaatggataagaaggatcttgcagaggctgctaaatctcaattttcc
cgtgattatagtgaccaccttgcccttgtccgggcctatgagggatggaaagatgctgaa
agagattttgcagggtatgactattgttggaaaaattttctatctgtgcaatctatgaaa
gcaattgattctcttaggaaagagttcttcaccttgctcaaggatgctggtctggttgat
agcaacactaccatctgcaatgcatggagccatgaagagcatctcattcgatcagttatt
tgctatggcctctatccaggactttcctctgttgtgcataatgaaaaatcattttctctg
aaaaccatggaggatggacaagtgcttctgtactctaactcggtcaatgctcgggaatct
aaaattccttatccatggctggttttcaatgagaagataaaggttaatgctgttttcctt
cgggattcaacagctgtttctgattcagtgttgcttctatttggtggaagcatgtccaag
ggggacattgatggacatctgaagatgctgggaggatacttggaattcttcatgaaacct
gctatagccgaaatgtatcaaaccttgaggagagaacttgatgaactgattcagaccaaa
cttttgaatcccaggatggatatacacgtgtatcatgagctcctatgtgccatacgttta
ctgctttcagaagataaatgtgatggcaaatttgtatttggcaatcaagtactgaagccc
tcgaagatctctgttatgtcaacacagccagccttagtgtcaaggactgaaagtggtcct
ggaggtgataattctaagtctcagctccaaacattgctaaccagggttggatatgctgca
ccaacttacaagacaaagcagttgaagaacaaccaatttcgagctactgtggagtttaat
ggaatgcaaattatggggcaaccttgcaataataagaagagtgcagagaaagatgcagca
gttgaggcgctgcagtggctgatgggtgggacccagacaggacatgaatacgtcaatcac
atgtcaatgctactaaagaaaagcaagaaggatcattactga
DBGET
integrated database retrieval system
