Hevea brasiliensis (rubber tree): 110663476
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Entry
110663476 CDS
T05150
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110663476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hbr04131
]
110663476
Membrane trafficking [BR:
hbr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110663476
Hops complex
110663476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WDR55
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
110663476
NCBI-ProteinID:
XP_021678482
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MANVSVAAEWQLLSNRFYRKLEIYQMRWKHVDLSRNKVACAPFGGPIAIIRDDSKIVQLY
SESALRKLRIFNSAGVLISETIWKHPGGRLIGMSWTDDQTLICIVQDGTIYRYNINAECL
EPNYSMGKECFEQNVVDCVFWGNGVVCLTEAGKLFCVADFKDIKPYKLADPIIRMEEELP
HCMAVIEPQYTVSGNVVVLLGVGDGIVTVDDDDVRQVESDDLRGPVQKLAVSHNGRILAR
FTHDGYLVMSNMQFDTIFEYQCESDLPPEQMAWCGLDSVLLYRDDMLLVVGPSEYCISYI
YDEPVILIPECDGVRILSNTTLEFLQRVPDSTESIFKIGSTSPASLLVDALDHFDRRSAK
ADENLRLIRTSLPEAVEACVDAAGHEFDVSRQRTLLRAASYGQAFFGFGSNFQRDCIQEM
CKTLRVLNAVRDFVIGVPLSIQQYKSLTAPVLIGRLINAHQHLLALRLSEYLGMHQEVVI
MHWACSKITASLAIPDATLLEILLDKLKICKGISYAAVAAHADKSGRRKLAAMLVEYESR
SSKQIPLLLSIGEEDTALTKATESGDPDLVYLVLFHIWLKRPALEFFGTIQARSFARDLF
ITYARSYKHEFLKDFFLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKLIEKAQ
NLFSETKEHTFESKAAEEHAKLLRIQHELEVSTKQAIFVDSSISDTIRTCIVLGNHRAAM
KVKTEFKVSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACIDADEKGEAL
KYIPKLGDPRERAEAYARIGMAKEAADAASQAKDGELLGRLKLSFAQNTAASSIFDTLRD
RLSFQGVS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtctccgttgcggcggagtggcagctgctcagcaatcgtttctatcggaaa
cttgagatataccaaatgcggtggaaacacgtggacttgagccgcaacaaggtggcctgc
gccccattcggcggcccgattgccatcatccgcgacgactccaagatcgtccagctatac
tccgaatctgccctgcgcaaactccgtatcttcaactccgccggcgtcctcatctccgaa
accatctggaagcaccccggcggccgcctaatcggtatgtcatggaccgacgatcaaacc
ctaatctgcatagtccaagacggtacgatttatcggtacaatattaatgctgagtgtctc
gaacccaattattctatggggaaagagtgctttgagcagaatgttgtggactgcgtgttt
tgggggaacggtgtggtgtgtttgacggaggctggaaagttgttttgtgtggcagatttt
aaggatataaaaccgtataagctggcggatcccataattaggatggaggaggagctacca
cattgcatggctgtgattgaaccgcagtatacagtgtcggggaacgttgtggtgctgttg
ggagtaggagatgggattgtgactgtggacgatgatgatgtgaggcaggtggaaagcgac
gatttgcgggggccagtgcagaaacttgcagtttcacataatgggaggattttggcgcgt
tttacgcatgatgggtatcttgtgatgtcaaatatgcagtttgataccatctttgagtat
caatgtgagtcagacctgcctccagagcagatggcttggtgtggattggatagtgtgttg
ctttatcgagatgatatgcttttggtggtgggtccttctgaatattgcatatcctacatt
tatgatgagcctgtgattcttatccctgagtgtgatggagtgaggattttatctaacacc
actctggagtttctacaacgggtacctgattccactgaatctatctttaagattggcagc
acctcacctgcatcattactagttgatgcattagatcattttgacaggcgaagtgctaag
gcagatgaaaatttgagattgattcgcacgtccttgccagaggctgttgaagcatgtgtt
gatgctgcaggtcatgaatttgatgtttcccgtcaacggacactattaagagctgcaagc
tatggccaagccttttttggctttggaagcaattttcaacgtgactgtattcaggagatg
tgcaaaactttgcgggtcttaaatgctgtgcgtgactttgtgattggtgtacctttaagt
attcagcaatataagtcacttacagcacctgttctgattggtcgtttgattaatgctcat
caacaccttcttgcactgcggctatcagagtaccttgggatgcatcaagaggtggtaata
atgcattgggcttgttcaaagataacggcttcgttagccattcctgatgcaactcttctt
gaaatcttgcttgataagctcaaaatatgcaagggcatatcttatgcagcagttgctgcc
catgctgataagagtggccggcggaagctggctgctatgcttgttgaatatgaatcacgc
tcctccaaacagattcctctcttgttaagcattggagaagaagatacagccttgacgaag
gcaactgaaagcggtgatcctgaccttgtttaccttgtcctatttcacatatggctaaag
aggccagccttagagtttttcggaacgatacaagcgcgatcttttgcacgtgatttgttt
ataacctatgcacggagttataaacatgaattcttgaaggacttcttcctatcaactggg
cagcttcaagatgtggcttttcttttatggaaagaatcatgggaacttggaaaaaatcca
atggcaagtaaaggatctcctcttcatggtccgcgcataaagcttattgaaaaggcccaa
aaccttttctcagagactaaggaacataccttcgagtcaaaagctgctgaagagcatgca
aaattgttaagaattcaacatgagttagaagtgtctacaaagcaggctatttttgttgat
tcaagtatcagtgatactattaggacatgcattgtattaggaaatcatcgagctgcaatg
aaagtgaaaacagagtttaaggtttctgagaagagatggtattggcttaaagttttcgct
ttggcaacaattagagattgggatgccctggaaaagttttccaaggagaagaggccacca
attggttatagaccatttgtggaagcatgcattgatgctgatgaaaaaggggaagctctg
aaatatattccaaaacttggggatcctagagaaagagctgaggcttatgctcggattggc
atggcaaaggaagctgctgatgctgcttcccaagcaaaagatggggaattgcttggacga
ttgaaattgagttttgcacaaaacacagcagcatcatcaatttttgatactctccgagat
cggctgtccttccaaggcgtttcttag
DBGET
integrated database retrieval system