Hevea brasiliensis (rubber tree): 110663914
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Entry
110663914 CDS
T05150
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110663914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110663914
03041 Spliceosome [BR:
hbr03041
]
110663914
03036 Chromosome and associated proteins [BR:
hbr03036
]
110663914
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110663914
Spliceosome [BR:
hbr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110663914
Complex B
110663914
Complex C
U2 SnRNP specific factors
110663914
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110663914
TFTC complex
110663914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
110663914
NCBI-ProteinID:
XP_021679093
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MYLYSLTLQRATGIVSAINGSFSGGKTQEIVVARGKVLDLLRPDENGKLQTILSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGCRRIVPGQFL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSISGVDCGFDNPI
FAAIELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNEGHPDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQ
TEYGDIFKVTLDHENDKVKELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFQAI
GEEADVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQVESLMPIMDMKVANLFDEETPQ
IFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFNNAT
LVLSIGETVEEVSDSGFLDTTPSIAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSAPPESLLFLEVQASVGGEDGADHPASLFL
NAGLQSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVIVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIPLRYTP
RKFVLQPKKKLLVIIESDQGAYTAEEREAAKRECFEAAGMGENGSANADQMENGGEDEDK
DDPLSDEQYGYPKTESEKWVSCIRVLDPRTASTTCLLELQDNEAAFSVCTVNFHDKEHGT
LLAVGTAKGLQFWPKRSLVAGFIHIYKFVDDGRTLELLHKTQVEGVPLALCQFQGRLLAG
IGSVLRLYDLGKKRLLRKCENKLFPNTIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLY
IFADDCVPRWLTASYHIDFDTVAGADKFGNVYFVRLPQDVSDEIEEDPTGGKIKWEQGKL
NGAPNKVEEIVQFHVGDVITSLHKASLIPGGGECIIYGTVMGSLGALLPFTSRDDVDFFS
HLEMHLRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDMQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttacagtcttacgctgcaacgagcgaccggcatcgtctccgcaatcaacggc
agtttttccggcggcaagacccaagaaattgtagtagctcgtggaaaggtacttgatcta
ctccgccccgacgagaacggtaagcttcagaccattctctctgttgaaatcttcggtgct
attcgctctctagctcagttcagactaactggatctcaaaaggactatatagttgttggg
tctgattcaggaagaatcgtaattctagaatataacaaggagagaaatgtttttgataaa
atacaccaggaaacttttgggaaatctgggtgtcgccggattgttccgggccagtttttg
gccattgacccgaaaggaagagctgtgatgataggtgcatgtgagaaacagaagttagtt
tatgttttgaatagagatactgctgctaggttgactatatcctcaccgttagaggcgcat
aagtctcatactattgtgtattcaattagtggtgttgattgtgggtttgataacccaata
tttgcggctattgagttggattattcagaggcagaccaggattcgacggggcaggctgct
agtgaggcacagaagcatttgacgttttatgaacttgatttagggcttaatcatgtgtct
aggaagtggtctgagcaggttgataatggggcaaatatgcttgttacagtgcctggaggt
ggagatggaccaagtggagttttggtttgtgctgagaattttgtaatttataagaatgag
gggcatccagatgtgagagcagtgattcctaggcgcgcagatttacctgctgagcgagga
gttttgatagtttctgcagctactcataagcagaaatccatgtttttctttcttttgcag
acagaatatggtgatatttttaaggttacattggatcatgagaatgataaggttaaggag
ttgaaaattaagtattttgatacaattcctgttactgcttcaatgtgtgtgttaaaatca
gggtttttgtttgctgcatcagagtttgggaatcatgcactgtatcaatttcaggcaatt
ggggaggaagctgatgtggaggcctcatcagctactttaatggaaactgaggaaggtttc
cagcctgtgtttttccagccaagagggttgaagaatcttgttagaattgaccaggtggag
agcttgatgcctattatggatatgaaggttgctaatctttttgatgaggaaacccctcag
atattttcactttgtgggcgtggtcctcggtcctcattgaggatattgaggccaggtttg
gccattagtgagatggctgtttcacagcttcctggtgtaccaagtgcagtctggactgtg
aaaaagaatgttaatgatgagtttgatgcatatattgttgtgtccttcaacaatgcaact
cttgtgctttcaattggagaaacagttgaggaagttagtgacagtgggtttcttgatact
acaccctccatagctgtttctttgataggtgatgattctttgatgcaagttcacccaaat
ggcatcaggcatataagggaagatgggcgtataaatgaatggaggactcctggaaagaga
acaattgtgaaggttggctccaatagacttcaagtcgttattgctttaagtggaggggag
cttatatattttgaggttgatgttactggtcagctaatggaggtggagaagcatgagatg
tctggagatgtggcctgtttggatattgcccctgttccggaaggaagacagaggtcccga
ttccttgcagttggttcatatgacaacaccatccgtatcttatctttggatcctgatgat
tgtatgcaaattctaagtgttcaaagtgtttcagcacctcccgaatccctcctctttctc
gaggttcaggcatcagtaggtggggaggatggtgctgatcatcctgctagccttttcctt
aatgctggtttgcagtctggggttctattcaggacagtggtggacatggtgacaggccag
ctttctgattctcgttcccggttcttgggcttgagggcaccaaaactcttctccgtcatt
gtgagaggccgacgtgcaatgttgtgcttatcaagtcgaccctggcttggttatattcac
caagggcatttcctgttaacacccctttcatatgagactcttgaatttgctgcttcattc
tcatctgatcagtgtgcggaaggtgttgtggctgtagctggggatgcactgaggattttt
accattgaaaggttgggtgagacatttaatgaaaccgcaatacctctgaggtacactcca
agaaagtttgtgcttcaacctaagaagaaacttttggttattattgagagtgaccaagga
gcatatacagcagaggagcgtgaagctgctaaaagggagtgttttgaagccgctgggatg
ggggaaaatggaagtgccaatgctgaccagatggagaatggtggtgaggatgaagataaa
gatgatccactctctgatgagcagtatggttatccaaagacagaatcagaaaagtgggtt
tcttgcatcagagttcttgacccaaggacagcatccacaacttgtctgctagagcttcag
gacaatgaagctgcatttagtgtgtgcacagtaaacttccatgacaaggagcatggaact
cttttagctgttggtactgcaaagggactccagttttggcccaaaagaagtttagttgct
gggttcattcacatctataagtttgtggatgatggcagaaccctggaacttttgcataag
acacaagtggaaggtgtgccacttgcattatgccagtttcagggaagactgcttgctggg
ataggatcagtgctcagactgtatgacttggggaagaagaggttgcttaggaaatgtgag
aataagttgttccctaacactatagtttctattcacacttatcgtgataggatctacgtt
ggtgatattcaagagtcattccatttctgcaagtataggcgggatgaaaatcagctctat
atatttgcagatgattgtgttccaagatggcttactgcatcataccacatagattttgat
actgtggcaggtgctgacaagtttgggaatgtctattttgtgcggttgccacaggatgtt
tctgatgagatagaggaagatccgactggcggaaaaataaagtgggaacagggaaagctt
aatggagccccaaacaaggtagaggagattgtacagtttcatgttggtgatgtgattact
agcctgcataaagcatccctaattcctggtggtggagagtgcatcatatatgggacggtg
atggggagcttgggggcactgcttccgttcacctctcgcgatgatgttgacttcttttca
cacttggagatgcatttgaggcaggaccacccaccattgtgtggaagagaccatatggca
tatagatctgcgtattttccagttaaggatgtgattgatggggatttatgtgagcagttc
ccaacacttcctcttgatatgcagagaaaaattgctgatgaattggatagaactcctggg
gagatactgaagaaacttgaagaagttcgaaataaaataatttaa
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integrated database retrieval system
