Hevea brasiliensis (rubber tree): 110663960
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Entry
110663960 CDS
T05150
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110663960
03036 Chromosome and associated proteins [BR:
hbr03036
]
110663960
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110663960
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110663960
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110663960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Mov-10_helical
Motif
Other DBs
NCBI-GeneID:
110663960
NCBI-ProteinID:
XP_021679161
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MSLFLEILRCVLCCVEDRRDENDDETYCVNTSWEPRVSRSIVPFNFRTIFGSRSSNSANN
GSTYVNSVERIYDVSNSSNSYRNYAPISSHIPETSSSWLPQSSSKEATYSSSPTPSRPKP
SPSPSEPLPSFKPTVAPASSSVTSQQTKANHVLVQKGTSPIYMIPKDIKDLIKKDKVPGV
LKKPLSMSTYKDYFAALLYAEDFYIEKWSEFKLENITLKLQQASIFKLSYFTENHEKDNK
TFVTFEIDSCREKRPFLLSRDFIFARPSGNKTEPFQGVIYRVVRSTTVLVEFGEDFYAQH
HPSRRYDVSFSFNRVCLKRAHQAVEAASDPLFKSYIFPDCDFRKRHSASSTAYFNYELDA
DQTSAVCQILAFQGPPPYLIEGPLCVTKPKRYECKQLSKTGLVIQEAVLEIYRSSQKHRV
LLCAPINSTCDLLTRSLMKHIPESEIFRANAAFREIDGVPTDILPSCIYAGQCFSCPRLQ
ELQKHRVILSTYVSTFWLCNEGIAVGHFSHIFLVDASSATEPEAMVALANLANEKTAVIV
TGAPANHSGWVRSDIAGKNELMDSYFERLRKRNPYNRLDSMFITKLVSVKRKSDDIDSF
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttcttgaaatcttgcggtgtgttctttgttgtgttgaagatcgtagagat
gaaaatgatgatgaaacatattgtgtaaacacttcatgggaaccaagggtgtcacgaagt
attgttccttttaatttcaggacaatatttggttcaaggtcaagtaattcagcaaacaat
ggatccacatatgttaactcagtggaaagaatatatgatgtgtctaatagttcaaatagt
tacagaaattatgcacctatatcttcccatattccagaaacatcttcctcttggctgcca
caatcttcatccaaagaagctacatattcttcaagtccaactccatcaagacctaaacca
tctccatcaccctctgagccccttccatcttttaagccaacagtggctccagcttcctca
agtgtcactagtcaacagacaaaagccaaccatgtattagttcaaaagggtacatcaccc
atttatatgattcccaaggatataaaagatttgatcaagaaagacaaggtgcctggagtt
ctgaaaaagccattgtctatgtcaacatataaggattattttgctgctcttctttatgct
gaagacttctatattgagaaatggagtgaattcaaattggagaatatcacattaaagttg
caacaagcatcaatctttaaactgtcttacttcacagagaatcatgagaaggataataaa
acctttgtgacatttgagattgactcgtgtcgtgagaagcggccatttcttttatcaagg
gactttatctttgcaagaccttcaggaaataaaactgagccatttcagggtgttatctat
cgagtggtgaggagcacaactgtgctagttgaattcggtgaagatttttatgctcagcat
catccatctcgcagatatgatgttagcttctcatttaacagagtttgtttaaaaagggct
catcaagcagttgaagccgcttcagatcctttatttaaaagttacattttccctgattgt
gacttcagaaagagacactctgcatcatcaactgcctattttaattatgaacttgatgca
gatcaaacatccgcggtttgtcagatcctagcctttcaggggccaccaccttatctcatt
gagggcccactctgtgtaactaaaccaaaaaggtatgaatgtaaacaactatcaaaaact
ggattggttatccaagaagcagtgcttgaaatttatagaagctctcaaaagcaccgagtt
cttttatgtgcacctattaacagcacatgtgatttgctgacaagaagcttgatgaagcac
attcctgaatcggaaatttttcgagctaatgctgcatttcgagagatagatggggtgcct
actgatatccttccttcatgtatttatgcaggtcaatgtttttcttgtcctcgtcttcag
gaacttcagaaacatagagtaatattgtcaacttatgtgagtaccttctggctatgtaat
gaaggcattgctgttggacattttagtcacattttcttggtggatgcctcatcagctact
gagcctgaggcaatggtggcactggctaatttggctaatgagaaaactgctgtaatagtc
actggtgcaccggcaaaccattcaggttgggtccgctctgatattgctgggaaaaatgaa
ctgatggattcatattttgaaagacttcgcaagagaaatccatacaatagactagattca
atgtttatcacaaagttggtcagcgtcaagcgcaaatcagatgatatagatagcttttag
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