KEGG   Hevea brasiliensis (rubber tree): 110665270
Entry
110665270         CDS       T05150                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
hbr  Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hbr03009]
    110665270
Ribosome biogenesis [BR:hbr03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    110665270
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_SPT8 VPS8_N WD_LRWD1 Beta-prop_ELP1_2nd
Other DBs
NCBI-GeneID: 110665270
NCBI-ProteinID: XP_021681000
LinkDB
Position
Unknown
AA seq 481 aa
MRLSVSAIRIEREMGNGGEALVACSDRSMGTGIAIWDIRTGDPLLHIPTCASPPHGLLCL
GNQFLVASQVNKHGSVGGGAIFTWPLNKSQSPLRSYPIEAIGPISCTMDGVYLAGGAPSG
NVYIWEVANGRLLKTWRAHHKSLKCMAFSNDDSVLISGSDDGMICVWSMVSLLDMENLES
SPSLLHYSSEHRSSISGLLTTSSANSTFISSSLDGTCKAWDLVSGRLIQTQEHPLGITAI
VLHPAERFLLGGSIDGRIFVSVLNIGLVDDPFVVAEDQLFVLEGHKGSITALAFSTLGLI
SASEDGTVRLWDAISWVTIRRFNYQKGAVTNLALIPHSSLLTSSNHQRVPYQIRLSLLEK
CPQPEANSSKGTVALLHSCSSLKDHQTSLDFRTNSLNHQIFEMEEAHTPAALQMKLETSI
DNRMWATRMTKHVMEINKHLQSRLLDLMQNRLLWSAEDDSPTARKSKKLKIGSPSLEGEK
L
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgcgtctttctgtttctgcgatacggatagagagagagatgggaaacgggggagaggct
ttggtggcatgcagtgataggagtatggggacagggatagcaatatgggatatacgaact
ggagatcctctcttgcacattccgacttgtgcttccccacctcatgggttattgtgcttg
ggaaaccagtttcttgtagcttctcaggttaacaagcacggatctgttggtggtggggct
atattcacctggcccttgaacaagtcacaatcaccacttcggagctaccctattgaagcc
attgggccgatttcttgcaccatggatggagtgtatcttgcgggcggtgctccttcggga
aatgtttatatttgggaggttgctaatggaagactgctcaaaacatggcgcgcacatcat
aagtctttgaagtgcatggcattttccaatgatgactctgttcttatttcaggttcagat
gatggtatgatctgcgtgtggtctatggttagtttgctggatatggagaatttggaaagc
tcaccttcgttgttacactactcatccgagcataggtcctccataagtggtctgttaaca
acatccagcgcaaactcaacttttatatcaagctctctggacggtacctgcaaggcttgg
gacctggtttcaggtaggcttatacaaactcaagaacatccactggggataactgcgatc
gtccttcatccagcagagcgatttctgcttggtggaagtatagatggaagaatatttgtt
agtgtgcttaacattggactagtggatgatccttttgttgttgcagaagatcaactgttc
gtgctagaaggacacaaaggatcgataacggcattggccttcagtacattaggtcttata
tcagcatctgaggatggtactgtccgcctctgggatgctattagttgggtgactatacga
agatttaactaccaaaaaggggcagtaactaatcttgcattgattccgcattcttcactg
cttacttcatcaaaccatcaaagagttccctatcagatccgtctttctttgctcgaaaag
tgtcctcagccagaagcgaactcatccaagggaacagtcgctctccttcactcgtgttct
tccctgaaggaccatcaaacctctttggatttcagaaccaattcattgaaccaccaaata
tttgagatggaggaagcacatacacctgcagccctgcagatgaagttagaaacaagcata
gacaaccggatgtgggctacaagaatgacaaaacatgtcatggaaataaacaagcattta
cagtctcggctgctagatttgatgcagaaccgattgttatggagtgctgaagatgattca
cccactgcaagaaagagtaagaagcttaaaattggaagtccatcactcgagggagaaaag
ctatag

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