KEGG   Hevea brasiliensis (rubber tree): 110666371
Entry
110666371         CDS       T05150                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03420  Nucleotide excision repair
hbr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110666371
  09124 Replication and repair
   03420 Nucleotide excision repair
    110666371
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hbr04121]
    110666371
   03400 DNA repair and recombination proteins [BR:hbr03400]
    110666371
Ubiquitin system [BR:hbr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110666371
DNA repair and recombination proteins [BR:hbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110666371
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz Beta-prop_EIPR1 WD40 Beta-prop_EML Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st TAF1C_beta-prop PCM1_C Granin
Other DBs
NCBI-GeneID: 110666371
NCBI-ProteinID: XP_021682537
LinkDB
Position
Unknown
AA seq 562 aa
MAPQTRRMAFPKVVIERDTDSEQSSSDDEDDVDEEENIPQSESDAEGGGVTENGSGEKDE
EDMDSKKQRKVPITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCP
HRVATEYGVIPAPLRNTHNPLEYVFQRQLRPSIPPIKPAYVIPDRVCCAVIRYHSRRVTC
LEFHPTKNNILLSGDKKGQVGVWDFEKVHEKMVYANIHTCIVNNMRFNPSNDGMVYAASS
DGTISCTDMETGISSSLLNLNPDGWQGPSSWRMLYGMDVNSEKHVVLIADNFGFLYMIDM
RSNNKCGEAVLIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDMRRLEAGSSLSDLVH
KRVVNCAYFSPLSGSKILTTAQDNRLRVWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEW
DPKDPSESLAVIGRYISENYNGAALHPIDFIDVSTGQLVAEVMDPNITTISPVNKLHPRD
DILASGSSRSLFIWKPKEKSEVVEQKDEGKIVICGSAEKKFKRRFWGGSDDSDDDGFKSK
GKNFKLKKSQSKAAHCPRKVKR
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggcccctcaaacgagaagaatggcgtttccgaaagtggtgattgagagggacacggac
tctgagcaaagctcgtcagacgatgaggatgatgttgacgaagaagagaatattccccaa
tcagaatcagatgcagaaggaggaggagtgacagagaatggaagtggagagaaagatgaa
gaggatatggattccaagaagcagaggaaagttcccattactattagtctcaagaaagtt
tgcaaagtttgcaaaaaacctggtcatgaagcgggatttaaaggagctacatacatagat
tgccctatgaaaccctgttttctctgcaaaatgcctggacacactacgatgacatgcccg
catagagtggctactgagtatggggtcattccagcacccctaagaaatacgcataatcca
ttggaatatgttttccagcgccagcttagaccaagcatacccccgataaagccagcatat
gtcataccagatcgagtatgttgtgcggtaattagatatcacagcaggcgggtgacttgt
ttggaatttcacccaacaaaaaataacatccttctatctggggataagaaaggacaagtt
ggagtctgggattttgagaaagtgcatgaaaaaatggtatatgcaaacatacacacttgt
attgtcaataacatgaggttcaacccttcaaatgatggtatggtgtatgctgcttcctca
gatggaaccatcagttgcactgacatggagactggaatttcatcatctttgttgaacctt
aaccctgatgggtggcagggaccaagcagctggagaatgctttatggcatggatgtcaac
tcagagaaacatgttgtacttatagctgataactttggttttctctatatgatagatatg
cgctccaacaataaatgtggggaggcagttttgatccataagaaaggtagcaaagtcgtt
ggccttcattgcaatcctgttcatccagagcttcttttgagctgtggaaatgatcatttt
gctcgtatatgggatatgcgtcgactcgaagcaggatcttctcttagtgatctggtgcat
aaacgtgttgttaattgtgcatatttctctccactgtctggcagcaaaattcttacaact
gcacaagataaccgtcttcgtgtgtgggattctatatttggaaatttggactccccaagc
cgagagattgtacatagtcatgatttcaacagacatctgactccttttcgagctgaatgg
gatcctaaggacccttcagagtctctcgcagttattggtcgttatataagtgaaaattat
aatggtgctgctttgcatcccattgatttcatagatgtcagcactgggcaattagttgcc
gaagttatggatccaaatatcacaaccatcagtcctgtgaacaagctacaccctcgggat
gatattttggcatctggcagttcaaggtcccttttcatttggaagcccaaggagaagtct
gaagtcgtggaacagaaggacgagggtaagattgttatttgtggaagtgctgagaagaag
ttcaaacggaggttttggggtggaagtgatgattctgatgatgatggatttaaatccaaa
ggcaagaattttaagctaaagaagtctcagtcaaaggcagctcactgtcctcgcaaggtt
aaacgctag

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