Hevea brasiliensis (rubber tree): 110666849
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Entry
110666849 CDS
T05150
Name
(RefSeq) Niemann-Pick C1 protein-like isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
110666849
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110666849
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbr02000
]
110666849
Transporters [BR:
hbr02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
110666849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
Folate_rec
Motif
Other DBs
NCBI-GeneID:
110666849
NCBI-ProteinID:
XP_021683180
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MASFLGCFAAVHVVILFASLLGAEKTGSGVTNGERHSEEYCAMYDICGERSDGKVLNCPY
GSQSVKPDELFSAKIQSLCPTIRGNVCCTEAQFDTLRAQVQQAIPFLVGCPSCLRNFLNL
FCELSCSPNQSLFINVTSTAEVGGNLTVDGIDYYLSETFGEGLYKSCKDVKFGTMNTRAI
EFVGGGAKNSKEWLAFIGQKTPPGFPGSPYAINFKLSIPDSSEMKLMDVPAYSCGDTLLG
CSCGDCPLSPVCSNLEPPTPHKEDSCSIIVGPLKVKCVDFSLVIVFILLVSALVGWTLFH
QRRERKATGSTESLLKFMGEGEADSRNIIMDGKQASLMNRIKLPTVQSYMSNFYRQYGTK
VARNPTLVLCSSLAVVLVLCVGLIRIKVETKPDKLWVGQGSKAAEEKQFFDSHLAPFYRI
EQLILATLPDPKHDKKPSIVTDENIQLLFEIQNKVDGISANSSGSVVSLTDICMKPLGQD
CATQSVLQYFKMDPENYDYYGGVQHVEYCFQHYTSADTCLSAFEAPLDPSTALGGFFDNN
YTEASAFVVTYPVNNAIDEEGNAKAVAWEKAFIKLVEEELLPMMHSRNLTLSYSSESSIE
EELKRESTADVVTVIVSYAVMFAYISVTLGDVPYLSTFYVSSKVLLGLSGVVLVMLSVLG
SVGFFSAVGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQSLELPLDERISNALVEVG
PSITLASLSEILAFAVGSFTPMPACRVFSMFAALAVLLDFFLQITAFVALIVFDCRRSED
NRIDCFPCIKVPSSSGGPNEGIYQRRSSLLARYMKEVHAPILGLWGVQIVIIVIFVGFAL
ASIALCTRIESGLEQKIVLPRDSYLQGYFNNVSEYLRIGPPLYFVVEDYNYCLESRHTNQ
LCSISQCDSNSLLNEISRASLIPESSYIAKPAASWLDDFLVWISPEAFGCCRKFINGTYC
PPDDQPPCCSPDEDYCGLGGVCKDCTTCFLHSDLINNRPSTVQFREKLPWFLNALPSADC
AKGGHGAYTNSVDLNGYETGVIQASEFRTYHTPLNKQGDYVNAMRAAREFSSRISDSLKI
NIFPYSVFYIFFEQYLDIWRIALINIAIALGAIFIVCLLITSSFWSSAIILLVLLMIVVD
LMGIMAVLDIQLNAVSVVNLIMSIGIAVEFCVHIAHAFLASQGDRSHRAKQALSTMGASV
LSGITFTKLVGVIVLCFSRSEIFVVYYFQMYLALIIIGFLHGLIFLPVILSIVGPPSRRI
VMERQEDEASASSQLS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttttctgggttgcttcgctgctgtccatgtagtgattttgttcgcatcatta
ctgggtgcagagaagactggttcgggggtcacaaatggggaaagacattctgaagaatat
tgtgcaatgtatgacatatgtggagaacgcagtgatggaaaggttctgaattgcccttat
ggttcccaatctgtgaagcctgacgagcttttctcagccaagattcaaagcttgtgtcca
acaataaggggaaatgtttgttgtacagaggctcaatttgatacattgcgggcacaagtc
cagcaagctattcctttccttgtgggttgtccatcatgcttgaggaacttcttaaatctt
ttctgtgagctatcctgctccccaaatcaaagtcttttcatcaatgtgacttccactgct
gaggttggtggtaatttaactgtggatggtattgactattatttatctgaaacttttgga
gaagggctgtacaagtcatgcaaagatgttaagtttgggacaatgaatacacgggcaata
gaatttgttggtggtggtgccaaaaattccaaagaatggcttgcatttattggtcagaaa
acgccccctggatttcctgggtctccttatgccattaattttaagttgagcattcctgat
tcatctgaaatgaagcttatggatgtgcctgcttattcatgcggagacacgttattggga
tgctcttgtggtgactgcccgttatctccagtttgctcaaatttagagcctcctactccg
cacaaggaagattcctgttcaatcatagttgggcctcttaaggtcaaatgtgttgatttc
tcattagtgattgtatttattctgctggtttctgcattagtgggatggactttgttccat
cagagaagagaacggaaagctacaggtagtacagaatcattgttaaagtttatgggtgaa
ggagaagctgattctaggaatattataatggatggaaagcaggcttctctgatgaatagg
atcaaacttccaactgttcaaagttacatgtcaaacttttacaggcaatatggtacaaag
gttgctcgaaaccccactcttgttttgtgttcgtccttggcagttgttcttgtactttgt
gtaggtttaattcgtattaaagtggagacaaagcctgataagttgtgggtaggccaaggg
agtaaggcagctgaagaaaaacagttttttgatagccaccttgcccccttctacagaatt
gaacagcttattctagcaactttgcctgatccaaagcatgacaagaagcccagtattgtt
acagatgaaaatatccagttactctttgaaattcagaacaaggttgatggcatatctgct
aattcttctggttcagttgtatctctaactgacatttgcatgaagcctttgggccaggat
tgtgctactcaaagtgttctacagtattttaagatggaccctgaaaattatgactactat
ggaggagtccaacatgtagaatattgttttcagcattatacttctgctgatacatgtttg
agtgcatttgaggccccccttgatccaagcactgccttaggaggatttttcgataataac
tacactgaggcttctgcatttgttgttacctatccagttaataatgcaattgatgaagaa
ggcaatgcaaaggcagtggcatgggaaaaagctttcattaagttagtggaggaggagcta
ctaccaatgatgcattctagaaatcttactctttcatactcaagtgagagctcaattgag
gaagaattgaaaagagaaagcactgcagatgttgtaactgtaatcgtgagctacgctgtg
atgtttgcttacatatctgtgacgttgggtgatgtaccttatttgtctacattctatgtc
tcatccaaggtattgcttggtctttcaggagttgtgcttgtcatgctttctgtcctcgga
tctgttggatttttcagtgctgttggagtcaagtcaaccctgataatcatggaagtcatt
ccttttctagttttggcagttggagtggataacatgtgtattttggtgcatgctgtgaaa
cggcaatcattggagctacctttagatgaacgaataagtaatgcactggttgaagttggc
ccttcaataacacttgctagtttatctgagattctggcatttgctgttggaagtttcact
cctatgccagcatgtcgtgttttctctatgtttgcagctttggctgttctattggacttc
tttttgcaaattactgcttttgttgcattgattgtatttgactgtcggagatctgaggat
aacaggattgattgtttcccatgcataaaagttccttcatcttctggagggcctaatgaa
ggcatctaccagagaagatcaagtctgctggctagatatatgaaggaggttcatgcaccg
attctggggctttggggagttcaaatagtcatcattgtgatctttgttggatttgctttg
gcaagcattgcactatgtacaaggattgagtctggtttagagcaaaagattgttcttccc
cgagactcttaccttcagggttatttcaataacgtttctgaatatttgagaattggaccg
ccattgtattttgttgtcgaggattacaattattgccttgaatcaagacatacaaaccag
ttatgctctatcagccaatgtgattcaaactcactcctgaatgagatatcaagagcctca
ttaattcctgaatcaagttacattgcaaagcctgctgcatcatggcttgatgattttttg
gtgtggatatcaccagaggcttttggttgctgtcgaaagtttataaatggtacttattgc
ccaccagatgatcagccaccttgctgctcacctgatgaggattattgtggtttaggtgga
gtttgcaaagattgtacaacgtgtttccttcattcggatcttattaacaaccgaccatct
acagtgcaattcagggagaagcttccatggttcctaaatgctctgccatctgctgattgt
gcaaagggtggtcatggggcttataccaacagtgtggatctaaatggttatgagactggt
gttatacaagcttcagagtttcgtacatatcacacaccgcttaacaaacaaggtgactat
gttaatgcaatgcgagctgcgcgggaattcagttcaagaatatctgattctctgaagatc
aacatctttccatattctgtgttctacatcttctttgagcaatatctggatatttggagg
atagctttgatcaatattgctatagcccttggtgctatatttattgtttgcctgcttatc
acttccagtttttggagttctgctatcattctacttgttttgctgatgattgttgtcgat
ctaatgggtataatggcagttctggatattcaactaaacgctgtctccgtcgtaaacctt
ataatgtcaataggaattgctgttgagttttgtgtacatattgcacatgctttcttggca
agtcaaggggataggagccatagggctaagcaggctctgagtactatgggagcttctgtc
cttagtggaattactttcacgaagcttgttggagtcattgtcctttgcttctcaagatca
gaaatttttgtggtctattacttccaaatgtacctggcactgatcattattggtttcttg
catgggctaatatttctaccagtgatactgagtattgtcgggccaccatcgagacgtata
gtaatggagagacaagaagatgaggcatctgcttcatcacaactgagctga
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